Gene SeHA_C3596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3596 
SymboldacB 
ID6492571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3483968 
End bp3485401 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content55% 
IMG OID642743716 
ProductD-alanyl-D-alanine carboxypeptidase/endopeptidase 
Protein accessionYP_002047328 
Protein GI194450548 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 
TIGRFAM ID[TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value0.971845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTTT CCAGATTTAT CATCGGATTG ACCACCAGTA TAGCGTTCAG CGTTCAGGCC 
GCGAATATTG ACGAATACAT CAAACAGCTT CCGGCCGGCG CCAACCTCGC GCTGATGGTG
CAAAAGATTG GCGCGCCCGC GCCGGCTATT GATTATCATA GTCAGCAGAT GGCGCTTCCC
GCCAGTACCC AAAAGGTGAT TACCGCGCTG GCGGCGCTGA TTCAACTCGG CCCGGATTTC
CGTTTTACGA CCACGCTGGA GACTAAAGGC AACGTCGATA ACGGCATCCT GAAAGGTGAC
TTAATTGCGC GCTTCGGTGG CGATCCAACG CTAAGACGTC AGGATATTCG CAATATGGTC
GCGACGCTGA AAAAGTCCGG CGTCACGCAA ATCGACGGCA ATGTGCTTAT CGACACGTCG
ATTTTCGCCA GCCACGATAA AGCGCCAGGC TGGCCGTGGA ACGACCTGAC GCAGTGTTTC
AGCGCGCCTC CCGCCGCCGC CATTGTTGAC CGCAACTGTT TTTCTGTGTC GCTTTATAGC
GCGCAAAAAC CAAACGATTT AGCTTTTATT CGCGTGGCCT CTTATTATCC GGTAACAATG
TTCAGCCAGG TACGGACTCT GCCGCGCGGT TCGGCAGACG CGCAGTATTG CGAGCTGGAT
GTTGTGCCTG GCGATTTGAA CCGTTATACG CTTACCGGCT GTTTACCACA GCGCGCCGAC
CCGCTGCCGC TGGCCTTTGC TATTCAGGAC GGCGCCAGCT ACGCTGGCGC GATCCTCAAG
CAGGAACTGA AAGAGGCCGG GATAACTTAC CGCGGCACGC TGCTGCGCCA GACGCAGGTT
AACGAGCCCG GAACGATCGT CGCCAGTAAA CAGTCGGCGC CACTGCACGA TCTGCTTAAG
ATTATGCTGA AAAAGTCAGA CAACATGATC GCCGATACTG TTTTTCGGAT GATTGGTCAT
GTCAGGTTTA ACGTGCCTGG CACCTGGCGG GCGGGATCGG ATGCCGTTCG CCAGATCCTA
CGCCAACAGG CGGGAATTGA TATCGGCAAT ACCATTATTG CCGACGGTTC CGGTCTTTCT
CGCCATAACC TGATCGCTCC CGCCACGATG ATGCAGGTGC TGCAATATAT CGCCCAACAC
GATAACGAGC TGAACTTTAT CTCTATGCTG CCGCTGGCGG GCTATGATGG TTCATTACAA
TACCGCGCCG GGCTGCATCA GGCGGGCGTA GACGGTAAGG TTTCGGCGAA AACCGGATCA
CTGCAGGGCG TGTATAATCT GGCGGGCTTT ATTACCACCG CAAGCGGGCA ACGGATGGCA
TTTGTACAGT ATTTGTCCGG CTACGCGGTT CCACCTGCCG ATCAGCGTAA TCGCCGAATC
CCGCTGGTAC GCTTCGAGAG TCGGTTGTAT AAGGATATTT ATCAGAATAA CTGA
 
Protein sequence
MRFSRFIIGL TTSIAFSVQA ANIDEYIKQL PAGANLALMV QKIGAPAPAI DYHSQQMALP 
ASTQKVITAL AALIQLGPDF RFTTTLETKG NVDNGILKGD LIARFGGDPT LRRQDIRNMV
ATLKKSGVTQ IDGNVLIDTS IFASHDKAPG WPWNDLTQCF SAPPAAAIVD RNCFSVSLYS
AQKPNDLAFI RVASYYPVTM FSQVRTLPRG SADAQYCELD VVPGDLNRYT LTGCLPQRAD
PLPLAFAIQD GASYAGAILK QELKEAGITY RGTLLRQTQV NEPGTIVASK QSAPLHDLLK
IMLKKSDNMI ADTVFRMIGH VRFNVPGTWR AGSDAVRQIL RQQAGIDIGN TIIADGSGLS
RHNLIAPATM MQVLQYIAQH DNELNFISML PLAGYDGSLQ YRAGLHQAGV DGKVSAKTGS
LQGVYNLAGF ITTASGQRMA FVQYLSGYAV PPADQRNRRI PLVRFESRLY KDIYQNN