Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3596 |
Symbol | dacB |
ID | 6492571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 3483968 |
End bp | 3485401 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642743716 |
Product | D-alanyl-D-alanine carboxypeptidase/endopeptidase |
Protein accession | YP_002047328 |
Protein GI | 194450548 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 0.971845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGATTTT CCAGATTTAT CATCGGATTG ACCACCAGTA TAGCGTTCAG CGTTCAGGCC GCGAATATTG ACGAATACAT CAAACAGCTT CCGGCCGGCG CCAACCTCGC GCTGATGGTG CAAAAGATTG GCGCGCCCGC GCCGGCTATT GATTATCATA GTCAGCAGAT GGCGCTTCCC GCCAGTACCC AAAAGGTGAT TACCGCGCTG GCGGCGCTGA TTCAACTCGG CCCGGATTTC CGTTTTACGA CCACGCTGGA GACTAAAGGC AACGTCGATA ACGGCATCCT GAAAGGTGAC TTAATTGCGC GCTTCGGTGG CGATCCAACG CTAAGACGTC AGGATATTCG CAATATGGTC GCGACGCTGA AAAAGTCCGG CGTCACGCAA ATCGACGGCA ATGTGCTTAT CGACACGTCG ATTTTCGCCA GCCACGATAA AGCGCCAGGC TGGCCGTGGA ACGACCTGAC GCAGTGTTTC AGCGCGCCTC CCGCCGCCGC CATTGTTGAC CGCAACTGTT TTTCTGTGTC GCTTTATAGC GCGCAAAAAC CAAACGATTT AGCTTTTATT CGCGTGGCCT CTTATTATCC GGTAACAATG TTCAGCCAGG TACGGACTCT GCCGCGCGGT TCGGCAGACG CGCAGTATTG CGAGCTGGAT GTTGTGCCTG GCGATTTGAA CCGTTATACG CTTACCGGCT GTTTACCACA GCGCGCCGAC CCGCTGCCGC TGGCCTTTGC TATTCAGGAC GGCGCCAGCT ACGCTGGCGC GATCCTCAAG CAGGAACTGA AAGAGGCCGG GATAACTTAC CGCGGCACGC TGCTGCGCCA GACGCAGGTT AACGAGCCCG GAACGATCGT CGCCAGTAAA CAGTCGGCGC CACTGCACGA TCTGCTTAAG ATTATGCTGA AAAAGTCAGA CAACATGATC GCCGATACTG TTTTTCGGAT GATTGGTCAT GTCAGGTTTA ACGTGCCTGG CACCTGGCGG GCGGGATCGG ATGCCGTTCG CCAGATCCTA CGCCAACAGG CGGGAATTGA TATCGGCAAT ACCATTATTG CCGACGGTTC CGGTCTTTCT CGCCATAACC TGATCGCTCC CGCCACGATG ATGCAGGTGC TGCAATATAT CGCCCAACAC GATAACGAGC TGAACTTTAT CTCTATGCTG CCGCTGGCGG GCTATGATGG TTCATTACAA TACCGCGCCG GGCTGCATCA GGCGGGCGTA GACGGTAAGG TTTCGGCGAA AACCGGATCA CTGCAGGGCG TGTATAATCT GGCGGGCTTT ATTACCACCG CAAGCGGGCA ACGGATGGCA TTTGTACAGT ATTTGTCCGG CTACGCGGTT CCACCTGCCG ATCAGCGTAA TCGCCGAATC CCGCTGGTAC GCTTCGAGAG TCGGTTGTAT AAGGATATTT ATCAGAATAA CTGA
|
Protein sequence | MRFSRFIIGL TTSIAFSVQA ANIDEYIKQL PAGANLALMV QKIGAPAPAI DYHSQQMALP ASTQKVITAL AALIQLGPDF RFTTTLETKG NVDNGILKGD LIARFGGDPT LRRQDIRNMV ATLKKSGVTQ IDGNVLIDTS IFASHDKAPG WPWNDLTQCF SAPPAAAIVD RNCFSVSLYS AQKPNDLAFI RVASYYPVTM FSQVRTLPRG SADAQYCELD VVPGDLNRYT LTGCLPQRAD PLPLAFAIQD GASYAGAILK QELKEAGITY RGTLLRQTQV NEPGTIVASK QSAPLHDLLK IMLKKSDNMI ADTVFRMIGH VRFNVPGTWR AGSDAVRQIL RQQAGIDIGN TIIADGSGLS RHNLIAPATM MQVLQYIAQH DNELNFISML PLAGYDGSLQ YRAGLHQAGV DGKVSAKTGS LQGVYNLAGF ITTASGQRMA FVQYLSGYAV PPADQRNRRI PLVRFESRLY KDIYQNN
|
| |