Gene SeHA_C3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3574 
SymbolnlpI 
ID6489014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3463567 
End bp3464451 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content48% 
IMG OID642743697 
Productlipoprotein NlpI 
Protein accessionYP_002047311 
Protein GI194447710 
COG category[R] General function prediction only 
COG ID[COG4785] Lipoprotein NlpI, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTT TTTTGCGCTG GTGTTTCGTT GCGACAGCAC TTACGCTTGC AGGATGCAGT 
AATTCCGCCT GGCGTAAAAG TGAAGTCCTC GCAGTACCAT TGCAACCGAC TTTACAGCAG
GAAGTGATTC TGGCGCGTAT GGAACAGATT CTTGCCAGTC GGGCTTTAAC CGATGACGAA
CGCGCACAGC TTTTATATGA GCGCGGAGTG TTGTATGATA GTCTTGGTTT GAGGGCATTA
GCGCGAAATG ATTTTTCACA AGCGCTGGCA ATCAGACCGG ATATGCCTGA AGTATTCAAT
TACTTAGGCA TTTATTTAAC GCAGGCAGGC AATTTTGATG CTGCCTATGA AGCGTTTGAT
TCTGTACTAG AGCTTGATCC AACTTACAAC TACGCGCACT TAAACCGCGG TATCGCATTG
TATTACGGCG GCCGTGATAA GTTAGCGCAA GATGATCTGC TGGCGTTTTA TCAAGACGAT
CCCAATGATC CTTACCGCAG CCTGTGGCTG TATCTTGTTG AGCAGAAGCT TAATGAGAAG
CAGGCGAAAG AAGCGTTAAA AGCACGCTTC GAAAAATCGG ATAAAGAGCA ATGGGGATGG
AACATTGTCG AGTTCTACCT GGGCGACATT AGCGAAGCAA CGCTGATGGA AAGGCTCAAG
GCGGACGCAA CGGATAACAC CTCGCTCGCT GAGCATCTCA GTGAAACCAA CTTCTATTTA
GGTAAGTATT ACCTAAGTCT GGGGGATTTG GACAGCGCCA CGGCTCTGTT CAAACTGGCG
GTGGCCAACA ACGTTCATAA CTTTGTTGAG CACCGATACG CATTGTTGGA ATTATCGCTC
CTGGGCCAGG ACCAAGATGA CCTGGCAGAA TCGGACCAGC AATAG
 
Protein sequence
MKPFLRWCFV ATALTLAGCS NSAWRKSEVL AVPLQPTLQQ EVILARMEQI LASRALTDDE 
RAQLLYERGV LYDSLGLRAL ARNDFSQALA IRPDMPEVFN YLGIYLTQAG NFDAAYEAFD
SVLELDPTYN YAHLNRGIAL YYGGRDKLAQ DDLLAFYQDD PNDPYRSLWL YLVEQKLNEK
QAKEALKARF EKSDKEQWGW NIVEFYLGDI SEATLMERLK ADATDNTSLA EHLSETNFYL
GKYYLSLGDL DSATALFKLA VANNVHNFVE HRYALLELSL LGQDQDDLAE SDQQ