Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3550 |
Symbol | garD |
ID | 6491997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 3440696 |
End bp | 3442267 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642743673 |
Product | galactarate dehydratase |
Protein accession | YP_002047287 |
Protein GI | 194451178 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2721] Altronate dehydratase |
TIGRFAM ID | [TIGR03248] galactarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0864027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATA TCGAAATTCG CCAGGAATCG CCATCGGCGT TTTATATAAA AGTACATGAA ACCGATAATG TCGCAATTAT TGTTAATGAC CACGGTCTTA AAGCCGGAAC ACGTTTTCCG GATGGCCTGG AACTGACTGA ACATATTCCG CAAGGCCATA AAGTTGCTCT GACGGATATC CCCGCTCACG GCGAAATCAT CCGTTATGGC GAAGTCATCG GTTATGCGGT ACGCGACATC CCACGCGGAA GCTGGATCGA CGAGTCGCTG GTTGAACTGC CAAAAGCGCC GCCGCTGAAT ACGCTACCGC TGGCGACCAA AGTACCGGAA CCGCTGCCGC CGCTGGAAGG CTATACGTTT GAGGGCTATC GTAACGCCGA TGGCAGCGTC GGCACCAAAA ATCTGCTTGG CATTACCACC AGCGTGCACT GTGTGGCGGG CGTGGTCGAT TATGTGGTGA AAGTGATTGA GCGCGATCTC CTGCCCAAAT ACCCGAATGT CGATGGCGTT GTAGGGCTAA ACCATCTGTA CGGCTGCGGC GTGGCAATCA ACGCGCCGGC GGCGGTCGTG CCGATTCGCA CGATTCATAA TATCGCGCTC AACCCCAATT TTGGCGGCGA AGTGATGGTG ATTGGCCTCG GTTGCGAAAA ACTGCAGCCG GAACGGCTGC TGGAAGGCAC CGAGGATGTT CCCGCCATCG CCGTTGAAAG CGCCAGTATT GTGCGTTTAC AGGACGAGCA GCATGTCGGC TTTAAATCAA TGGTCGACGA TATTTTGCGG GTCGCCGAAC GCCATCTGAC GAAACTGAAC CAGCGCCAGC GCGAAACCTG CCCGGCCTCC GAGCTGGTCG TCGGGATGCA GTGTGGCGGC AGCGATGCGT TTTCCGGCGT CACGGCAAAC CCGGCGGTGG GTTATGCTTC CGATCTGTTG GTACGCTGCG GCGCGACCGT CATGTTCTCG GAGGTCACCG AAGTGCGCGA TGCCATTCAT CTTCTGACGC CGCGTGCCAT CAACGAAGCC GTGGGTAAAC GCCTGCTGGA TGAAATGGCC TGGTACGATA ACTATCTTGA TATGGGGAAA ACCGATCGCA GCGCTAACCC GTCCCCTGGC AACAAAAAAG GCGGTCTGGC GAACGTCGTG GAAAAAGCGT TGGGCTCTAT CGCTAAATCG GGTAAGAGCG CCATTGTCGA AGTATTGTCG CCGGGCCAGC GCCCCACCAA ACGCGGCCTG ATTTACGCCG CGACGCCCGC CAGCGATTTC GTCTGCGGCA CGCAGCAGGT CGCTTCCGGC ATTACCGTAC AGGTCTTTAC CACCGGACGC GGCACGCCGT ACGGGCTGAT GGCGGTGCCG GTCATTAAAA TGGCGACGCG TACCGAGCTG GCGAACCGCT GGTATGACTT AATGGATATC AATGCAGGCA CCATCGCCAC GGGTGAAGAG ACAATCGAAG ATGTGGGCTG GAAGCTGTTT CACTTTATTC TCGATGTCGC CAGCGGCCGG AAAAAGACTT TCTCGGACCA GTGGGGCCTA CATAACCAAC TGGCGATATT TAACCCGGCG CCAGTGACCT GA
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Protein sequence | MANIEIRQES PSAFYIKVHE TDNVAIIVND HGLKAGTRFP DGLELTEHIP QGHKVALTDI PAHGEIIRYG EVIGYAVRDI PRGSWIDESL VELPKAPPLN TLPLATKVPE PLPPLEGYTF EGYRNADGSV GTKNLLGITT SVHCVAGVVD YVVKVIERDL LPKYPNVDGV VGLNHLYGCG VAINAPAAVV PIRTIHNIAL NPNFGGEVMV IGLGCEKLQP ERLLEGTEDV PAIAVESASI VRLQDEQHVG FKSMVDDILR VAERHLTKLN QRQRETCPAS ELVVGMQCGG SDAFSGVTAN PAVGYASDLL VRCGATVMFS EVTEVRDAIH LLTPRAINEA VGKRLLDEMA WYDNYLDMGK TDRSANPSPG NKKGGLANVV EKALGSIAKS GKSAIVEVLS PGQRPTKRGL IYAATPASDF VCGTQQVASG ITVQVFTTGR GTPYGLMAVP VIKMATRTEL ANRWYDLMDI NAGTIATGEE TIEDVGWKLF HFILDVASGR KKTFSDQWGL HNQLAIFNPA PVT
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