Gene SeHA_C3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3546 
SymbolgarR 
ID6487856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3438480 
End bp3439370 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content56% 
IMG OID642743669 
Producttartronate semialdehyde reductase 
Protein accessionYP_002047283 
Protein GI194450515 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01505] 2-hydroxy-3-oxopropionate reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.370176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA AAGTTGGCTT TATTGGCTTA GGCATCATGG GTAAGCCCAT GAGCAAAAAC 
TTACTGAAAG CAGGGTATTC GCTGGTGGTG TCCGATCGTA ATCCTGAAGC GATTGCTGAC
GTCATTGCCG CAGGCGCGGA AACGGCCTCT ACGGCGAAGG CGATCGCTGA ACAGTGTGAC
GTCATCATCA CGATGCTGCC TAACTCTCCG CATGTGAAAG AGGTTGCGCT GGGCGAGAAC
GGTATCATCG AAGGCGCGAA GCCGGGAACC GTATTGATTG ATATGAGTTC TATCGCGCCG
CTGGCAAGCC GTGAAATCAG CGATGCGCTG AAGGCGAAGG GCGTTGAGAT GTTGGATGCG
CCGGTCAGCG GCGGCGAGCC GAAGGCGATT GATGGCACGC TGTCGGTGAT GGTAGGGGGC
GATAAAGCCA TTTTCGACAA GTACTACGAC CTGATGAAAG CGATGGCGGG TTCCGTGGTG
CATACCGGCG ATATCGGCGC AGGCAACGTC ACAAAACTGG CTAACCAGGT GATCGTGGCG
TTGAATATCG CCGCCATGTC TGAAGCGCTG ACGCTGGCGA CTAAAGCGGG CGTCAACCCG
GATCTGGTCT ATCAGGCGAT TCGCGGCGGT CTGGCTGGCA GCACGGTACT GGATGCGAAA
GCGCCGATGG TCATGGACAG AAACTTTAAG CCAGGTTTCC GTATCGATCT GCACATTAAA
GATCTGGCGA ATGCGCTGGA TACCTCCCAC GGCGTTGGCG CGCAGCTCCC GCTGACCGCC
GCCGTTATGG AAATGATGCA GGCGTTACGC GCGGATGGAC ACGGTAATGA CGACCATAGC
GCGCTGGCGT GCTACTACGA AAAACTGGCG AAAGTGGAAG TCACTCGCTA A
 
Protein sequence
MTMKVGFIGL GIMGKPMSKN LLKAGYSLVV SDRNPEAIAD VIAAGAETAS TAKAIAEQCD 
VIITMLPNSP HVKEVALGEN GIIEGAKPGT VLIDMSSIAP LASREISDAL KAKGVEMLDA
PVSGGEPKAI DGTLSVMVGG DKAIFDKYYD LMKAMAGSVV HTGDIGAGNV TKLANQVIVA
LNIAAMSEAL TLATKAGVNP DLVYQAIRGG LAGSTVLDAK APMVMDRNFK PGFRIDLHIK
DLANALDTSH GVGAQLPLTA AVMEMMQALR ADGHGNDDHS ALACYYEKLA KVEVTR