Gene SeHA_C3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3520 
Symbol 
ID6491738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3415858 
End bp3417102 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content56% 
IMG OID642743648 
Productserine/threonine transporter SstT 
Protein accessionYP_002047262 
Protein GI194448355 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3633] Na+/serine symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.234928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.00469986 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTACGC AACGAGCATC AGGGCTACTG CAGCGTTTAG CGCAAGGCAG TCTGGTTAAA 
CAAATTTTAG TGGGTCTGGT ACTGGGGATT TTACTGGCAT GGATTTCTAA GCCTGCGGCA
GAAGCGGTTG GCTTGCTTGG CACCCTGTTC GTCGGCGCCT TAAAAGCGGT CGCCCCCGTT
CTGGTGCTGA TGCTGGTAAT GGCCTCGATC GCCAACCACC AGCACGGCCA AAAAACCAAT
ATTCGCCCTA TTCTCTTTCT TTACCTGCTA GGCACCTTTT CAGCCGCGCT GGCGGCCGTT
GTGTTCAGCT TCGCCTTCCC TTCAACCCTG CATTTGTCCA GTAGCGCCCA GGATATCGTG
CCGCCGTCCG GCATTGTAGA AGTCCTGCGC GGTCTGCTGA TGAGCATGGT GTCGAACCCC
ATCGACGCGC TGCTGAACGC TAACTATATC GGGATTCTGG TATGGGCCGT CGGTCTGGGA
TTTGCCCTGC GTCATGGCAA TGAAACCACC AAAAACCTCG TGAACGATAT GTCTAACGCC
GTGACCTTTA TGGTGAAACT GGTGATCCGT TTCGCGCCAG TCGGTATTTT TGGTCTGGTT
TCATCAACGC TTGCAACCAC CGGCTTCTCT ACCCTGTGGG GTTATGCGCA CCTGCTGGTC
GTCTTGATTG GCTGTATGCT GCTGGTCGCG CTGATGGTCA ACCCGCTGTT GGTATTCTGG
AAAATTCGTC GCAACCCTTA TCCGCTGGTG TTCGCCTGCC TGCGTGAAAG CGGCGTTTAT
GCCTTCTTTA CCCGCAGCTC TGCCGCCAAT ATTCCAGTGA ATATGGCGCT GTGCGAAAAG
CTGAATCTGG ACAGGGATAC TTACTCCGTT TCCATTCCGC TGGGCGCCAC TATCAATATG
GCCGGCGCGG CAATTACCAT TACGGTTCTG ACGTTGGCGG CAGTCCATAC GTTAGGCGTC
CCGGTGGATC TGCCTACAGC GCTGCTGCTG AGCGTGGTGG CCTCGCTGTG TGCTTGCGGC
GCCTCCGGCG TGGCAGGCGG TTCATTGCTG CTGATCCCGC TGGCGTGCAA CATGTTTGGC
ATCCCGAACG ATATCGCGAT GCAGGTAGTA GCGGTCGGCT TTATTATCGG CGTATTGCAG
GATTCGTGTG AAACGGCGCT GAACTCGTCT ACCGATGTTC TGTTCACTGC GGCAGCCTGC
CAGGCAGAGG ACGAACGTCT GGCGAATAAC GCCTTGCGTA GCTAA
 
Protein sequence
MATQRASGLL QRLAQGSLVK QILVGLVLGI LLAWISKPAA EAVGLLGTLF VGALKAVAPV 
LVLMLVMASI ANHQHGQKTN IRPILFLYLL GTFSAALAAV VFSFAFPSTL HLSSSAQDIV
PPSGIVEVLR GLLMSMVSNP IDALLNANYI GILVWAVGLG FALRHGNETT KNLVNDMSNA
VTFMVKLVIR FAPVGIFGLV SSTLATTGFS TLWGYAHLLV VLIGCMLLVA LMVNPLLVFW
KIRRNPYPLV FACLRESGVY AFFTRSSAAN IPVNMALCEK LNLDRDTYSV SIPLGATINM
AGAAITITVL TLAAVHTLGV PVDLPTALLL SVVASLCACG ASGVAGGSLL LIPLACNMFG
IPNDIAMQVV AVGFIIGVLQ DSCETALNSS TDVLFTAAAC QAEDERLANN ALRS