Gene SeHA_C3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3517 
Symbol 
ID6491208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp3412583 
End bp3413275 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content55% 
IMG OID642743645 
Producthypothetical protein 
Protein accessionYP_002047259 
Protein GI194450555 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.743597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.000023852 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCTCAC AATGTGCCCG TTTTATCCGC CGCCTCTGTT TTACACGCCG GGCGTTAACA 
GTGGCGTGTT TTCTGCTTGT CGCAGCAGGC GTCGCGCTTT TCTATTCCAA CTGGCTTATC 
GTCAACGCCT CACAGCATCT GACATGGAAT GACATTCAGA CCGTTCCCGC CCGCAACGTC 
GGGCTGGTGT TAGGCGCCAA ACCCGGCAAT CGGTATTTTA CCCGGCGGAT TAATACTGCC 
GCCGCGTTGT ATCACGCCGG TAAAGTGAAG TGGCTGTTAG TCAGCGGCGA TAACGGCAAA 
AAAGAGTACG ATGAACCTTC GGCGATGCAG CAGGCGCTGA TAGCGAAAGG TGTGCCGGAA 
GCGGCCATTT TTTGTGATTA TGCCGGATTC TCCACGCTGG ACTCCGTAGT TCGCGCCCGG 
AAAGTGTTTG GCGAAAGCCG CATTACGATT ATCTCGCAAG CATTCCATAA TCAACGGGCG 
ATCTGGCTGG CGCAACAATA TGGCATTGAC GCTATCGGCG TTAACGCGCC GGATCTGAAT 
AAAAGGCACG GAACCTACAC ACGACTTCGG GAAAAGCTGG CGCGGGTTAG CGCGGTGCTG 
GATGCCAAAA TTTTGCACCG TCAGCCTAAA TATCTGGGCG CTGGCGTCAC TATTGGGGCT 
GATAGCGCAC ACGGGTGCCC TTCTCGCCAG TAA
 
Protein sequence
MLSQCARFIR RLCFTRRALT VACFLLVAAG VALFYSNWLI VNASQHLTWN DIQTVPARNV 
GLVLGAKPGN RYFTRRINTA AALYHAGKVK WLLVSGDNGK KEYDEPSAMQ QALIAKGVPE 
AAIFCDYAGF STLDSVVRAR KVFGESRITI ISQAFHNQRA IWLAQQYGID AIGVNAPDLN 
KRHGTYTRLR EKLARVSAVL DAKILHRQPK YLGAGVTIGA DSAHGCPSRQ