Gene SeHA_C3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3515 
Symbol 
ID6488927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3410712 
End bp3411848 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content54% 
IMG OID642743643 
Productmethyltransferase family protein 
Protein accessionYP_002047257 
Protein GI194450232 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.00000598825 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCACG TAGACGACGG TTTCCGTTCA CTGACGCTGA AACGTTTTCC GCAAACGGAT 
GATGTTAACC CGCTTCTGGC GTGGGAGGCG GCCGATGAGT ATCTGCTGCA ACAGTTGGAT
GAGACGGAAA TTCGCGGCCC GGTGCTGATC CTGAATGATA CGTTTGGCGC GCTAAGCTGT
GCGCTGGCGG AGCATTCGCC ATACAGTATT GGCGATTCGT ATTTAAGCGA ACTGGGTACG
CGAGAGAATT TACGCCATAA CGGCATCGCG GAGTCCAGCG TAACGTTTCT CGACAGTACC
GCTGACTACC CGCAGGCGCC GGGCGTGGTA TTGATTAAGG TACCGAAAAC GCTGGCGTTG
CTGGAACAGC AGTTACGCGC TTTGCGTAAG GTCGTTACGG CGCAAACGCG TATTATCGCC
GGCGCGAAAG CGCGAGATAT TCATACCTCT ACGCTGGAAC TGTTTGAAAA AGTGCTGGGC
CCAACCACGA CGACGCTGGC GTGGAAGAAA GCGCGCCTGA TTAACTGTAC CTTCAGTCAT
CCGCAACTGG CCGACGCGCC GCAAACGCTA AACTGGAAAC TGGAAGATAC AGGCTGGACG
ATTCACAACC ACGCGAATGT GTTTTCTCGT ACCGGATTGG ATATCGGCGC GCGCTTCTTT
ATGCAGCATT TGCCGGAAAA CCTCGACGGG GAGATTGTCG ATCTCGGCTG CGGCAATGGG
GTGATTGGCC TGAGCTTACT GGCGAAAAAT CCGCAGGCGA ACGTGGTATT TGTCGATGAA
TCGCCGATGG CGGTAGATTC CAGCCGTTTG AATGTAGAAA CGAACCTGCC GGAAGCGTTC
GAACGCTGCG AATTTATGAT CAACAACGCG CTCTCCGGCG TGGAGCCGTT CCGTTTTAAC
GCTGTGTTCT GCAACCCGCC GTTCCACCAG AAACATGCGC TGACGGATAA TATCGCCTGG
GAGATGTTCC ATCATGCCCG CCGCTGCCTG AAAATCAACG GCGAACTGTA TATTGTGGCG
AACCGCCATC TGGACTATTT CCACAAGCTG AAGAAGATTT TCGGTAATTG CGCGACGATA
GCAACCAACA ATAAGTTTGT TATTTTGAAA GCGGTGAAGC AGGGACGCCG TCGATAA
 
Protein sequence
MSHVDDGFRS LTLKRFPQTD DVNPLLAWEA ADEYLLQQLD ETEIRGPVLI LNDTFGALSC 
ALAEHSPYSI GDSYLSELGT RENLRHNGIA ESSVTFLDST ADYPQAPGVV LIKVPKTLAL
LEQQLRALRK VVTAQTRIIA GAKARDIHTS TLELFEKVLG PTTTTLAWKK ARLINCTFSH
PQLADAPQTL NWKLEDTGWT IHNHANVFSR TGLDIGARFF MQHLPENLDG EIVDLGCGNG
VIGLSLLAKN PQANVVFVDE SPMAVDSSRL NVETNLPEAF ERCEFMINNA LSGVEPFRFN
AVFCNPPFHQ KHALTDNIAW EMFHHARRCL KINGELYIVA NRHLDYFHKL KKIFGNCATI
ATNNKFVILK AVKQGRRR