Gene SeHA_C3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3509 
Symbol 
ID6491827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp3402520 
End bp3403164 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content54% 
IMG OID642743637 
ProductPadR family transcriptional regulator 
Protein accessionYP_002047251 
Protein GI194448528 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00000000000686547 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAATC AACATGAAGG GTGTTGCAAA AACCGGGATC ATATGCACGA TGGTTGCTGC 
AAAGATCGAG AACATCAGCA TGAAGGCTGC CATAGCGCGC ATCAGCATGA GAACGCCAGT 
TGCGGCGGCG AGCACCGTCA CGGACACGGC TGTGGTCGTC ATGGACAGGG CGGTGGTCGA 
CGTCAGCGAT TTTTTGGCCA CGGGGAACTT CGGCTGGTCA TTCTTGATAT CCTGACCCGG 
GACGCCAGCC ACGGCTATGA ACTGATTAAA GCGATAGAAA ACCTGACGGG GGGCGGCTAT 
ACGCCAAGCG CTGGTGTGAT CTACCCTACG CTGGATTTTT TACAGGATCA GCAATTTATC 
ACGATTAGCG ACGAAGAAGG CGGGCGGAAA AAAATCGCGA TTACCGCGAA CGGCGCGCAA 
TGGCTTGATG AAAATCGCGA ACACCTGACG CATATTCAGG CGCGGCTAAA AGCCCGTTGT 
GTGGGCATGG AGTTACGTAA AAATCCGCAG ATGAAGCGGG CGCTGGATAA CTTCAAGGCC 
GTGCTGGATC TGCGGATAAA CCACAGCGAT ATCAACGACG CGCAAATCAA ACGCATTATC 
GGCGTGATTG ATCGCGCGGC GCTGGAAATC GCCGAACTGG ATTAA
 
Protein sequence
MQNQHEGCCK NRDHMHDGCC KDREHQHEGC HSAHQHENAS CGGEHRHGHG CGRHGQGGGR 
RQRFFGHGEL RLVILDILTR DASHGYELIK AIENLTGGGY TPSAGVIYPT LDFLQDQQFI 
TISDEEGGRK KIAITANGAQ WLDENREHLT HIQARLKARC VGMELRKNPQ MKRALDNFKA 
VLDLRINHSD INDAQIKRII GVIDRAALEI AELD