Gene SeHA_C3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3457 
Symbol 
ID6491781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp3360700 
End bp3361314 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content50% 
IMG OID642743586 
Productputative signal transduction protein 
Protein accessionYP_002047201 
Protein GI194448930 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.262114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAT TACGCCTGAT TGGACTAACT TTACTTGCGC TTAGCGCCAC CGCCGTCTCT 
CATGCTGAAG AGACGCGTTA CGTTTCTGAT GAACTGAATA CCTGGGTCCG CAGCGGTCCG 
GGAGATAATT ATCGCCTTGT GGGTACCGTC AACGCCGGCG AGGAAGTCAC GCTCTTACAG 
AGCGATGCCA ACTATGGTCA AATTAAAGAC AGTTCTGGTC GTACTGCCTG GATACCGTTA 
AAAGAACTGA ATACCACGCC AAGCCTGCGT ACCCGCGTGC CGGATCTTGA AAATCAGGTC 
AAAACGTTGA CCGATAAACT CAACAATATT GATACCACGT GGAATCAGCG CACCGCCGAT 
ATGCAGCAGA AAGTGGCGCA AAGCGACAGC GTCATCAACG GGCTAAAAGA AGAGAACCAG 
AAGCTGAAAA ACGAGCTGAT TGTCGCGCAG AAAAAAGTTA GCGCCGCGAA TCTGCAACTG 
GATGACAAAC AGCGCACCAT TATTATGCAG TGGTTTATGT ATGGCGGCGG CGTATTGGGT 
ATTGGCTTGC TGTTAGGGCT GGTGCTGCCG CATATGATCC CAAGCCGTAA ACGCAAAGAC 
CGCTGGATGA ACTAA
 
Protein sequence
MPKLRLIGLT LLALSATAVS HAEETRYVSD ELNTWVRSGP GDNYRLVGTV NAGEEVTLLQ 
SDANYGQIKD SSGRTAWIPL KELNTTPSLR TRVPDLENQV KTLTDKLNNI DTTWNQRTAD 
MQQKVAQSDS VINGLKEENQ KLKNELIVAQ KKVSAANLQL DDKQRTIIMQ WFMYGGGVLG 
IGLLLGLVLP HMIPSRKRKD RWMN