Gene SeHA_C3427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3427 
Symbol 
ID6491629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3332958 
End bp3333617 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content56% 
IMG OID642743558 
ProductDNA-binding transcriptional regulator QseB 
Protein accessionYP_002047173 
Protein GI194449190 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.374419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value0.844658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTT TACTGGTAGA AGATGACACA CTTATTGGCG ATGGCATAAA AGCGGGCCTG 
AGTAAAATGG GTTTCAGCGT CGACTGGTTT ACCGAGGGAC GTCCGGGCAA AGAGGCACTT
TACAGCGCGC CTTATGATGC GGTTATTTTA GATTTGACGC TGCCAGGCAT GGACGGACGG
GATATTTTGC GCGAATGGCG CGAAAAGGGT AAACAGGAAC CGGTACTGAT CCTGACGGCG
CGCGACGCGT TAGCAGAGCG CGTCGAGGGG CTACGTCTGG GCGCCGATGA CTATTTATGT
AAACCTTTCG CGCTCATTGA GGTCGCCGCC CGTCTGGAGG CGCTGGTACG CCGCGCCAGC
GGTCAGGCCA GTAGCGAATT GCGCCACGGC CAGGTGACGC TCAATCCAGG CAATCTCGTC
GCGACGCTTG CCGGCGAACC GCTGGCCCTA AAACCAAAAG AGTTCGCGTT GCTGGAACTC
TTACTGCGCA ACAAAGGTCG CGTGCTGCCG CGCAAGCTTA TTGAAGAGAA GCTGTATAAC
TGGGATGACG ACGTGTCCAG CAATGCAGTG GAAGTCCATG TTCATCATTT ACGCCGCAAG
CTCGGCAGCG AATTTATTCG CACCGTACAC GGCATCGGCT ACACCCTGGG TGACGCATGA
 
Protein sequence
MRILLVEDDT LIGDGIKAGL SKMGFSVDWF TEGRPGKEAL YSAPYDAVIL DLTLPGMDGR 
DILREWREKG KQEPVLILTA RDALAERVEG LRLGADDYLC KPFALIEVAA RLEALVRRAS
GQASSELRHG QVTLNPGNLV ATLAGEPLAL KPKEFALLEL LLRNKGRVLP RKLIEEKLYN
WDDDVSSNAV EVHVHHLRRK LGSEFIRTVH GIGYTLGDA