Gene SeHA_C3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3420 
Symbol 
ID6489444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3324782 
End bp3325264 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content48% 
IMG OID642743551 
Producttripartite ATP-independent periplasmic 
Protein accessionYP_002047166 
Protein GI194450011 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.336165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATAC TCACCAATGC ACTGAACAAA ATACTGGCCG GGTGCTGCTG TATTATTCTG 
GCGGTCATGG TTGCCTGCGT ATCCTGGCAG GTGGCGGCGC GCTTTATATT CAACGCGCCA
AGCAGCACGC TCGACGAATT CACCCAGATT CTTTTTATGT GGATGATTCT GTTAGGCGGC
GTCTATACCG CCGGATTAAA AAAACATTTA GCTATCGATT TGTTAGCGCA AAAACTCTCC
CGAACGCCCG CCCTCGTGCT CGACAGTATC ATTCAGGTGA TTATTACCGT GTTCGCGCTG
ATTTTTATGG TGTACGGCGG TGATATTATT GTTGAAAAAG CGGCGCACGT CAGCCAAATG
TCCCCGGTAT TAAAATGGCC TATGGATAAA GTCTATTGGG TCATGCCGAT TAGCGGCGTC
ATCCTGGTGT ACTACACCAT TGTGAACGTT ATTGATAATT ATCATCAGCG CCATCTTCGC
TAA
 
Protein sequence
MRILTNALNK ILAGCCCIIL AVMVACVSWQ VAARFIFNAP SSTLDEFTQI LFMWMILLGG 
VYTAGLKKHL AIDLLAQKLS RTPALVLDSI IQVIITVFAL IFMVYGGDII VEKAAHVSQM
SPVLKWPMDK VYWVMPISGV ILVYYTIVNV IDNYHQRHLR