| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3407 |
|---|
| Symbol | exbB |
|---|
| ID | 6487686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 3312167 |
|---|
| End bp | 3312901 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642743540 |
|---|
| Product | biopolymer transport protein ExbB |
|---|
| Protein accession | YP_002047155 |
|---|
| Protein GI | 194451250 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | [TIGR02797] tonB-system energizer ExbB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 0.512684 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTAATA ATTTGATGCA GACGGATCTT TCCGTCTGGG GCATGTATCA GCACGCCGAT
ATTGTCGTGA AGTGCGTGAT GATTGGTTTG ATTCTGGCGT CAGTCGTCAC CTGGGCTATC
TTCTTCAGTA AAAGCGTTGA ATTTTTTACG CAAAAGCGCC GCTTAAAGCG CGAACAACTG
CAATTAGCCG ATGCGCGCTC TTTAGATCAG GCTTCCGACA TTGCGGCAGG TTTCAGCGCA
AAAAGCCTCA GCGCACAGCT CATCAATGAA GCGCAGAATG AACTGGAACT CTCTCAGGGC
AGCGAAGATA ACGAAGGGAT TAAAGAACGT ACCGGCTTCC GTCTGGAACG TCGCGTCGCA
GCGGTTGGCC GCTACATGGG ACGAGGCAAC GGTTATCTGG CGACGATCGG CGCCATTTCC
CCCTTCGTCG GGTTGTTTGG CACCGTATGG GGCATTATGA ATAGCTTCAT CGGTATTGCG
CAAACGCAGA CCACCAACCT GGCGGTGGTC GCTCCTGGTA TTGCGGAAGC GCTGCTGGCG
ACGGCGATTG GGCTGGTAGC CGCGATCCCG GCGGTCGTCA TTTACAACAT CTTCGCACGT
CAGATAGGCA GTTATAAAGC AACGCTGGGC GACGTGGCGG CGCAGGTATT GCTGCTGCAA
AGCCGCGATC TTGATCTGAA TGCGAGCGCC AGTGCGCAGC CGGTACGCGC CGCGCAGAAA
TTACGGGTAG GGTAA
|
|---|
| Protein sequence | MGNNLMQTDL SVWGMYQHAD IVVKCVMIGL ILASVVTWAI FFSKSVEFFT QKRRLKREQL
QLADARSLDQ ASDIAAGFSA KSLSAQLINE AQNELELSQG SEDNEGIKER TGFRLERRVA
AVGRYMGRGN GYLATIGAIS PFVGLFGTVW GIMNSFIGIA QTQTTNLAVV APGIAEALLA
TAIGLVAAIP AVVIYNIFAR QIGSYKATLG DVAAQVLLLQ SRDLDLNASA SAQPVRAAQK
LRVG
|
|---|
| |