Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3375 |
Symbol | |
ID | 6489000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3283339 |
End bp | 3283824 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642743508 |
Product | hypothetical protein |
Protein accession | YP_002047123 |
Protein GI | 194449910 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 0.693838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCGA TTTTTTTAAA GCTCGACAAT ATCAAAGGCG AAAGCCAGGT TGAAGGCTTT GAAGATCAGA TAGAGATCAT GTCTTATAGC CACAATGTGG CAATGCAGGT AAATAACGAT GTTAGCCTCA CTGAGCGGAC TTCCGGGCGC GCGCATGTTG GTGAAATGTC GCTCACCAAA TTTGTCGACC TCGCCACGCC TGTGCTCAAT GAGTACTGCT GTAGCGGGAG GCTAATTAGA ACCGCGGTGC TGACGTTGTG CCGCAATGAC GACGGCAAAA TGCGGTCGCT TATCGTTTAT ACCCTGACAA ACGTGCTGAT ATCACAACTC AGTGTTAGCG GCGGCGCCGG CGGTAAGCCG GTGGAAACGA TGTCGCTGAA CTTCACGAAA ATCGAATGGC AAATCACTGC CGAGAAATCA GACGGCGCTC AGCAGGAGTC CAGAACGTCA GTATGGGATC TGGCGATGAA CCAGATAGGG AAATGA
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Protein sequence | MDAIFLKLDN IKGESQVEGF EDQIEIMSYS HNVAMQVNND VSLTERTSGR AHVGEMSLTK FVDLATPVLN EYCCSGRLIR TAVLTLCRND DGKMRSLIVY TLTNVLISQL SVSGGAGGKP VETMSLNFTK IEWQITAEKS DGAQQESRTS VWDLAMNQIG K
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