| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3362 |
|---|
| Symbol | |
|---|
| ID | 6488213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 3271093 |
|---|
| End bp | 3271935 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642743495 |
|---|
| Product | HpcH/HpaI aldolase/citrate lyase family protein |
|---|
| Protein accession | YP_002047110 |
|---|
| Protein GI | 194447458 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0977965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 0.788969 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATA TTTCTCATAC ACCGACACGT AGCTGGCTTT TTACCCCAGC AATTCGACCA
GAACGTTTCA TAAAAGCAGT TGAAAGTGCG GCGGACATTT CTATTATCGA TCTTGAAGAT
TCCGTCACCC CGAATGACAA GGCGCAGGCC CGGAAAATTG CGATGCAGTT CCTTTCATCC
CGACCAAACT CATCGCTGAA AATAGCATTA AGAATTAATG GAATGAATAC TCATGCTGGC
ATTGAAGACC TGCATATGTT ACTGGAATGC CGTTTTTTTC CTGATTACAT TATTCTTCCG
AAAACAGAGT CAGCCGCGCA CCTGCAAATC GTGGATAGTC TTATCATGAT GGCTGGTTCT
GATACTCGCC TTATTGGCAT TATTGAGTCA GTTGTTGGGC TTAATGCCGT AGAGTCTATT
GCGGACGCCA CCCCCAGACT CTGCGGGTTG ATGTTTGGCG CCGCAGATAT GGCGGCTGAC
ATTGGCGCCA CACCCGCCTG GGAGCCTCTT GCGCTGGCGC GGGCCAGAAT AGTGGCTGCC
TGCGCTATGA AAGGGCTTCT TGCAATAGAT GCTCCCTTCT TTGATATAGG CGATTTTTCA
GGTCTGAAAG AGGAAACGCT GCAGGCGCTC AGTTTTGGTT TTTCTGCAAA ATCGGCTATT
CACCCCGCTC AGATTAGTGT AATCAACGCC GCATTTACTC CTACAACGGC AGAAATTAAT
CATGCTCGTG CAGTACTGAC AGAGAATGCC AAAGGCGTCG GGATCGTTAG CGGCATGATG
ATAGATGCAG CCGTTGCCCG TCAGGCCCGG AGATTACTCG CCCGGGCAGG GATCTTTTCC
TGA
|
|---|
| Protein sequence | MPDISHTPTR SWLFTPAIRP ERFIKAVESA ADISIIDLED SVTPNDKAQA RKIAMQFLSS
RPNSSLKIAL RINGMNTHAG IEDLHMLLEC RFFPDYIILP KTESAAHLQI VDSLIMMAGS
DTRLIGIIES VVGLNAVESI ADATPRLCGL MFGAADMAAD IGATPAWEPL ALARARIVAA
CAMKGLLAID APFFDIGDFS GLKEETLQAL SFGFSAKSAI HPAQISVINA AFTPTTAEIN
HARAVLTENA KGVGIVSGMM IDAAVARQAR RLLARAGIFS
|
|---|
| |