| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3343 |
|---|
| Symbol | |
|---|
| ID | 6488683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 3255480 |
|---|
| End bp | 3256616 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642743476 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_002047092 |
|---|
| Protein GI | 194450201 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 0.368838 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAC TACCGCCGCT CAGTCTTTAT ATTCATATTC CCTGGTGTGT ACAAAAATGT
CCATATTGTG ACTTCAATTC CCATGCGTTG AAGGGCGAGG TGCCGCATGA CGACTACGTC
CAGCATCTGT TAAACGATCT GGATGCCGAC GTCGCCTGGG CGCAAGGGCG TGAAGTAAAG
ACCATTTTTA TTGGCGGCGG TACGCCAAGC CTGCTTTCCG GGCCGGCGAT GCAAACGCTG
CTGGACGGCG TGCGCGCGCG CCTGAATCTG GCGGCGGATG CGGAAATTAC CATGGAAGCG
AACCCCGGCA CGGTCGAAGC CGACCGCTTC ATCGACTATC AGCGCGCCGG CGTAAACCGG
ATCTCCATTG GCGTGCAGAG CTTTAGTGAG CCTAAGCTGA AACGTCTTGG CCGTATTCAC
GGTCCACAAG AGGCGATGCG GGCAGCAAGA CTGGCAAATG GACTTGGGCT ACGCAGCTTT
AACCTCGACT TGATGCATGG ATTGCCGGAT CAAACGCTGG AAGAGGCGCT GAATGATTTG
CGACAGGCGA TTGCGCTTAA TCCGCCGCAT CTCTCATGGT ATCAATTGAC GATTGAACCC
AACACTTTGT TCGGTTCGCG TCCGCCGGTT TTACCGGACG ATGACGCTCT GTGGGATATC
TTTGAGCAGG GCCACCAGTT ATTAACCGCC GCGGGCTATC AGCAATACGA AACGTCGGCC
TATGCCAAAC CCGGTTATCA GTGCCAGCAT AATCTGAACT ACTGGCGCTT TGGCGACTAT
CTGGGTATTG GCTGCGGCGC CCACGGTAAA GTCACCTTCC CGGGCGGCAG GATCCTGCGC
ACCACCAAAA CCCGTCACCC ACGCGGTTAT ATGCAGGGAC GTTACCTGGA AAGCCAGCGT
GACGTGAGTG ATGACGATAA ACCCTTTGAG TTCTTTATGA ACCGTTTTCG GTTGCTGGAG
CGCGCGCCTC GCGCCGAATT TGTCGACTAC ACCGGGCTTA CGGAAGCGGT TATTCGTCAG
CCAATCGACG AGGCTATTGC CCAGGGCTAC CTGACCGAAT GCGAGCAATA CTGGCAGATT
ACCCGTCACG GTAAACTGTT TTTAAACTCT CTTCTTGAGT TGTTTCTCGC GGAATAA
|
|---|
| Protein sequence | MAKLPPLSLY IHIPWCVQKC PYCDFNSHAL KGEVPHDDYV QHLLNDLDAD VAWAQGREVK
TIFIGGGTPS LLSGPAMQTL LDGVRARLNL AADAEITMEA NPGTVEADRF IDYQRAGVNR
ISIGVQSFSE PKLKRLGRIH GPQEAMRAAR LANGLGLRSF NLDLMHGLPD QTLEEALNDL
RQAIALNPPH LSWYQLTIEP NTLFGSRPPV LPDDDALWDI FEQGHQLLTA AGYQQYETSA
YAKPGYQCQH NLNYWRFGDY LGIGCGAHGK VTFPGGRILR TTKTRHPRGY MQGRYLESQR
DVSDDDKPFE FFMNRFRLLE RAPRAEFVDY TGLTEAVIRQ PIDEAIAQGY LTECEQYWQI
TRHGKLFLNS LLELFLAE
|
|---|
| |