Gene SeHA_C3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3339 
Symbol 
ID6489453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3253310 
End bp3254014 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content54% 
IMG OID642743472 
Productalanine racemase family protein 
Protein accessionYP_002047088 
Protein GI194449587 
COG category[R] General function prediction only 
COG ID[COG0325] Predicted enzyme with a TIM-barrel fold 
TIGRFAM ID[TIGR00044] pyridoxal phosphate enzyme, YggS family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value0.519694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATA TCGCGCATAA CCTGGCACAC ATCCGGGACA AAATATCCGC CGCGGCGACG 
CGTTGCGGCC GCTCTTCAGA AGAAGTTACG CTGCTTGCAG TGAGTAAAAC CAAACCTGCG
AGCGACATCG CAGAAGCCAT TGCCGCCGGA CAACGGGCAT TTGGTGAAAA TTATGTACAA
GAGGGGGTGG AAAAAATCCG CCACTTTCAG GAAGCGAAAG TGGAAGACCT GCACTGGCAC
TTTATAGGCC CTTTACAGTC CAACAAAAGT CGGCTGGTGG CCGAGCATTT TGACTGGTGT
CATACCATCG ATCGCCTGCG TATCGCCTCG CGGCTGAGCG AACAGCGTCC GGATAATCTG
CCGGCGCTAA ATGTTCTGAT CCAAATTAAT ATCAGCGATG AAAACAGCAA ATCAGGCATT
CCACTGGCGG AACTGGATGA GCTGGCCGCT GCGGTGGCTA CACTGCCGCG TCTGCGGCTT
CGCGGACTGA TGGCGATCCC GGCGCCAGAG TCAGATTATG TAAGGCAGTT TGAAGTCGCA
CGTCAAATGG CTGTAGCATT TGCCGGGCTG AAAGCGCGCT ACCCTGACGT TGATACCTTA
TCTCTGGGTA TGAGCGACGA TATGGAAGCC GCGATTGCGG CAGGTAGCAC AATGGTGCGC
ATCGGCACCG CTATCTTTGG TGCTCGTGAT TACACAAAAA ATTAA
 
Protein sequence
MNDIAHNLAH IRDKISAAAT RCGRSSEEVT LLAVSKTKPA SDIAEAIAAG QRAFGENYVQ 
EGVEKIRHFQ EAKVEDLHWH FIGPLQSNKS RLVAEHFDWC HTIDRLRIAS RLSEQRPDNL
PALNVLIQIN ISDENSKSGI PLAELDELAA AVATLPRLRL RGLMAIPAPE SDYVRQFEVA
RQMAVAFAGL KARYPDVDTL SLGMSDDMEA AIAAGSTMVR IGTAIFGARD YTKN