Gene SeHA_C3337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3337 
Symbol 
ID6490497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3251493 
End bp3252179 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content57% 
IMG OID642743470 
Productregulatory protein IclR 
Protein accessionYP_002047086 
Protein GI194447382 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.423625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAC AACCGAATCA AAGCCTGATA GATGGCATTC GCTGTCTGCA ATATCTGGTT 
TCCAGCGACC GTGCTATCGG ATGTCGCGAG CTTGCCCGGC TGATGGATAT TAATACCACG 
CGCGTTAATC GCCTGTTAAT GACGATGGCC TCTATTGGAC TCACGATGCA GGATGAGCAC 
CGACGCTATT TACCCGGGCC AGGCATTCAT GCTTTGGCGG CGCAGGCGAT TCGTGGTTCA 
GCGCTGTTCT CCCATGCGTT GCCTATCCTT GAACGCCATG CGCCCAAAGA CATCGTGGTG 
GCATTAGGCG TGCTATGGGA GGACCAGATT ATCTATATTT ATCACTCTAC GCCGGGTTCG 
CAGGGAAGTC AGGCGCTGGC GGGGTTTCGC ATGTGCCCGG CCTGGCAGTC GGTAACAGGA 
GTGGCGTTAC TGGCGGCAGA AAGCGATGAG GCGCTAATGC AGCGTTTTAC TCCGGAGCAA 
TGGCGTAATC TGGCGCCGCA TGTGGCGCAG CAGCGCCAGC GGGGATACGT GCTGTGGCAT 
CACGCTGATG GTGAAGTTTC TATGGCGCAA CCGCTAGGCA AGCACGCCGC AGCGCTGGCC 
TTTGCGGGAA TGTGGCGGAT TGATGAGGCG GAGGCGGCTG CGCGTTTACA GGCGCTGAAG 
GCACTAAACC AGCTTATTGC CCAGTAA
 
Protein sequence
MSSQPNQSLI DGIRCLQYLV SSDRAIGCRE LARLMDINTT RVNRLLMTMA SIGLTMQDEH 
RRYLPGPGIH ALAAQAIRGS ALFSHALPIL ERHAPKDIVV ALGVLWEDQI IYIYHSTPGS 
QGSQALAGFR MCPAWQSVTG VALLAAESDE ALMQRFTPEQ WRNLAPHVAQ QRQRGYVLWH 
HADGEVSMAQ PLGKHAAALA FAGMWRIDEA EAAARLQALK ALNQLIAQ