Gene SeHA_C3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3330 
SymbolgalP 
ID6490679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3245703 
End bp3247097 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content55% 
IMG OID642743463 
Productgalactose-proton symporter 
Protein accessionYP_002047079 
Protein GI194449909 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00323998 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value0.618679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACA ATAAAAAACA AGGGCGTTCC AACAAGGCCA TGACATTTTT TGTCTGCTTT 
CTTGCAGCCC TGGCAGGATT ACTTTTTGGC CTGGATATCG GCGTTATCGC CGGTGCTTTA
CCCTTCATTA CCGACGAGTT TCAGATTACC GCACACACTC AGGAATGGGT GGTCAGCTCC
ATGATGTTTG GCGCGGCCGT CGGCGCTGTC GGCAGCGGCT GGCTCTCCTT TAAGCTGGGC
CGTAAAAAAA GCCTGATGAT CGGCGCTATC CTGTTCGTCG CCGGTTCGCT GTTCTCCGCT
GCGGCGCCTA ACGTTGAAGT CCTGATTATT TCTCGCGTGC TGCTGGGTCT GGCCGTCGGC
GTCGCTTCCT ACACTGCACC GTTGTACCTG TCAGAGATCG CGCCGGAAAA AATTCGCGGC
AGTATGATCT CAATGTACCA GCTCATGATC ACCATCGGGA TTCTGGGCGC TTATCTGTCT
GACACCGCGT TCAGCTACAG CGGCGCATGG CGCTGGATGC TCGGCGTGAT CATCATCCCG
GCCATTTTGC TGCTGATCGG CGTCTTCTTC CTGCCGGACA GCCCGCGCTG GTTTGCGGCG
AAACGCCGTT TCCATGATGC TGAACGCGTC CTGTTGCGCC TGCGTGACAC CAGTGCGGAA
GCAAAACGTG AGCTCGATGA AATTCGCGAA AGTTTGCAGG TTAAACAGAG CGGTTGGGCG
CTGTTCAAAG AGAACAGCAA CTTCCGCCGC GCCGTGTTTC TTGGCATTTT GTTGCAGGTC
ATGCAGCAAT TTACCGGGAT GAACGTCATC ATGTATTACG CGCCGAAAAT CTTCGAACTG
GCGGGGTACA CGAATACCAC GGAGCAGATG TGGGGCACCG TTATTGTTGG TCTGACTAAC
GTGCTGGCAA CCTTCATCGC TATCGGCCTG GTTGACCGCT GGGGCCGCAA GCCGACCCTG
ACGCTGGGCT TCCTGGTCAT GGCGATTGGT ATGGGGATTC TGGGTACGAT GATGCACATC
GGCATCCATT CGCCGTCTGC GCAATACTTC GCTATCGCTA TGCTGCTGAT GTTCATCATT
GGATTTGCGA TGAGCGCTGG TCCGCTGATT TGGGTACTGT GCTCCGAAAT CCAGCCGCTG
AAAGGCCGCG ATTTCGGCAT CACCTGCTCC ACCGCGACCA ACTGGATTGC CAATATGATC
GTCGGCGCAA CGTTCCTGAC CATGCTGAAC AATCTGGGTA ACGCCAACAC CTTCTGGGTC
TACGCGGGCC TGAACGTACT GTTTATCCTG CTGACCCTGT GGCTGGTGCC GGAAACCAAA
CACGTTTCGC TGGAACACAT TGAACGTAAC CTGATGAAAG GTCGTAAACT GCGCGAAATC
GGCGCCCACG ACTAA
 
Protein sequence
MPDNKKQGRS NKAMTFFVCF LAALAGLLFG LDIGVIAGAL PFITDEFQIT AHTQEWVVSS 
MMFGAAVGAV GSGWLSFKLG RKKSLMIGAI LFVAGSLFSA AAPNVEVLII SRVLLGLAVG
VASYTAPLYL SEIAPEKIRG SMISMYQLMI TIGILGAYLS DTAFSYSGAW RWMLGVIIIP
AILLLIGVFF LPDSPRWFAA KRRFHDAERV LLRLRDTSAE AKRELDEIRE SLQVKQSGWA
LFKENSNFRR AVFLGILLQV MQQFTGMNVI MYYAPKIFEL AGYTNTTEQM WGTVIVGLTN
VLATFIAIGL VDRWGRKPTL TLGFLVMAIG MGILGTMMHI GIHSPSAQYF AIAMLLMFII
GFAMSAGPLI WVLCSEIQPL KGRDFGITCS TATNWIANMI VGATFLTMLN NLGNANTFWV
YAGLNVLFIL LTLWLVPETK HVSLEHIERN LMKGRKLREI GAHD