Gene SeHA_C3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3320 
Symbol 
ID6490035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3235737 
End bp3236753 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content52% 
IMG OID642743454 
Producthypothetical protein 
Protein accessionYP_002047070 
Protein GI194449550 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value0.915678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TTATCTGTAA TAATCCGGGA AATATCGAAT ACATTGAAAG AGATATTCCT 
CATTTAAAAG ACGATGAAGT ACTGTTAAAA ATTAAAGCGG TTGGTATTTG CGGCACCGAT
ATCCATGCGT TTGCCGGCCG CCAGCCCTTT TTTGCCTATC CGCGCGTGCT GGGTCATGAA
ATTTGCGGCG TGGCGGAAAT GTTGGGTAAA TCGTGCAGCA CGGCGAAGGT CGGCCAACGC
TATAGCGTTA TTCCCTGTAT TCCTTGCGGC GCTTGCGCAG CCTGCCGGGA AGGAAAAACC
AACTGCTGTG AGAACGTCTC GCTGTATGGT GTTCACCAGG ACGGCGGCTT TAGCGAATAT
CTGGCCGTTC GTGAACAAAA TCTGGTTGAA CTGTCGGATA ACCTCACCGA CAGCGCGGGC
GCGCTGGTTG AGTGTTTCGC CATCAGCGCC CATGCAGTAC GCCGCGCTGA CGTGAAGCCG
CAGCAAAACA TTTTGGTGGT CGGCGCCGGG CCGATTGGGC TGGCCGCCGC CGCGATAGCA
AAAGCCAAAG GCGCTCGCGT CGCGGTAGCT GATATTGACG CCGAACGCCG TCGTCTGGTC
GCCGAAAAGG TAGGCGTTGC AACGCTCGAT CCGTCGTCAG ACGACTATAT TGATGCGCTG
AAAGCCTGTT TCTCCGGTGA ATTAGCCGGC ACTGTGCTTG ATGCCACCGG CAATAAATCC
TCCATGAGCC GCGCTGTCGA TCTGATTCGT CACGGCGGAA AAATCGTCTT CATCGGGCTG
TATATCGGCG AGCTCGTCAT TGACGATCCG ACCTTCCATA AAAAAGAGAC CACGCTATTG
AGCAGCCGTA ACGCGACGCG GGAAGACTTC GAATGTGTCA TTGAGCTAAT GGCTCAGGGC
GCTATTAGCG AAACAATGAT GAAAAACCAG GAATTCGATT TCTATACGTT CGGCAACCAG
TACCAGAAGA ACGTGGTAGA AAACAAAAAA TTGGTTAAAG GCGTTATCAA ATTTTAA
 
Protein sequence
MKTLICNNPG NIEYIERDIP HLKDDEVLLK IKAVGICGTD IHAFAGRQPF FAYPRVLGHE 
ICGVAEMLGK SCSTAKVGQR YSVIPCIPCG ACAACREGKT NCCENVSLYG VHQDGGFSEY
LAVREQNLVE LSDNLTDSAG ALVECFAISA HAVRRADVKP QQNILVVGAG PIGLAAAAIA
KAKGARVAVA DIDAERRRLV AEKVGVATLD PSSDDYIDAL KACFSGELAG TVLDATGNKS
SMSRAVDLIR HGGKIVFIGL YIGELVIDDP TFHKKETTLL SSRNATREDF ECVIELMAQG
AISETMMKNQ EFDFYTFGNQ YQKNVVENKK LVKGVIKF