Gene SeHA_C3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3316 
SymbolspeB 
ID6489785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3231909 
End bp3232829 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content56% 
IMG OID642743450 
Productagmatinase 
Protein accessionYP_002047066 
Protein GI194449204 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID[TIGR01230] agmatinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT TAGGTCATCA GTACGATAAC TCACTGGTTT CTAATGCGTT TGGTTTTTTA 
CGTCTGCCAA TGAACTTCCA GCCGTATGAC AGCGATGCCG ACTGGGTGAT CACTGGCGTA
CCGTTTGATA TGGCAACGTC CGGTCGCGCT GGCGGTCGTC ATGGCCCGGC GGCGATCCGT
CAGGTGTCGA CCAACCTCGC CTGGGAACAT CACCGTTTCC CGTGGAATTT TGACATGCGC
GAGCGCCTGA ACGTCGTGGA CTGCGGCGAT TTGGTGTATG CGTTTGGCGA TGCCCGTGAA
ATGAGCGAAA AATTACAGGC GCACGCTGAA AAACTGCTGT CTGCAGGCAA GCGTATGCTC
TCTTTCGGCG GCGACCACTT CGTCACGCTG CCGCTGCTGC GCGCCCACGC GAAACATTTT
GGCAAAATGG CGCTGGTACA TTTTGACGCG CATACCGATA CCTACGCTAA CGGCTGCGAA
TTCGATCACG GCACGATGTT CTACACCGCG CCGAAAGAAG GCCTGATCGA TCCGCATCAT
TCGGTACAGA TCGGTATTCG CACCGAGTTT GACAAAGACA ATGGCTTTAC CGTGCTGGAT
GCCTGCCAGG TCAACGATCG CGGCGTGGAT GATATTCTCG CTCAGGTGAA ACAGATCGTC
GGCGATATGC CGGTCTATCT GACCTTTGAT ATCGACTGTC TGGATCCGGC GTTTGCGCCT
GGCACCGGTA CGCCGGTGAT CGGCGGTTTG ACCTCCGATC GCGCCATTAA ACTGGTACGC
GGTCTGAAAG ATCTGAACAT TGTCGGTATG GATGTAGTGG AAGTCGCGCC GGCTTACGAT
CAGTCGGAGA TCACCGCTCT GGCGGCCGCG ACGCTGGCAT TAGAAATGCT CTATATCCAG
GCGGCGAAGA AGGGCGAGTA A
 
Protein sequence
MSTLGHQYDN SLVSNAFGFL RLPMNFQPYD SDADWVITGV PFDMATSGRA GGRHGPAAIR 
QVSTNLAWEH HRFPWNFDMR ERLNVVDCGD LVYAFGDARE MSEKLQAHAE KLLSAGKRML
SFGGDHFVTL PLLRAHAKHF GKMALVHFDA HTDTYANGCE FDHGTMFYTA PKEGLIDPHH
SVQIGIRTEF DKDNGFTVLD ACQVNDRGVD DILAQVKQIV GDMPVYLTFD IDCLDPAFAP
GTGTPVIGGL TSDRAIKLVR GLKDLNIVGM DVVEVAPAYD QSEITALAAA TLALEMLYIQ
AAKKGE