Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3273 |
Symbol | recJ |
ID | 6491312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3193138 |
End bp | 3194871 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642743410 |
Product | ssDNA exonuclease RecJ |
Protein accession | YP_002047026 |
Protein GI | 194451392 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACAAC AGAGACAACT TCGTCGGCGC GAGGCTGATG AGACGGCGGA ACTCCCCGCC GATCTTCCTC CATTACTACG ACGTCTATAT GCCAGCCGGG GCGTTCGTAG CGCCCGCGAA CTGGAGCGCA GCGTGAAAGG AATGCTGCCC TGGCAACAGC TTAGCGGCAT AGATAACGCG GTGGAGATCC TCTACAACGC CTTTCGCGAA GGTATCCGCA TTATTGTTGT TGGCGATTTT GACGCCGACG GCGCGACCAG TACTGCGCTA AGCGTATTGG GAATGCGTGC GTTGGGATGT GACAACATCA GTTATCTGGT GCCTAATCGC TTTGAGGACG GCTACGGTTT AAGCCCGGAA GTGGTCGATC AGGCGAAGGC GCGCGGCGCG CAGCTTATCG TCACCGTAGA CAACGGCATT TCATCCCACG CCGGCGTAGC GCATGCAAAG ACGTTGGGGA TTCCGGTGAT CGTGACCGAT CACCACCTGC CAGGCGACAC GTTGCCGGAT GCCGAAGCGA TTATTAATCC CAATCTGCGC GACTGCGAAT TCCCGTCTAA GTCGCTGGCG GGCGTCGGCG TGGCGTTTTA CCTGATGCTG GCGTTGCGAA CATTTTTGCG CGACAAAGGA TGGTTCGACG AGCGCAACAT CGCGCCGCCG AATCTGGCGG AGCTGCTGGA TTTAGTGGCG TTGGGTACGG TAGCAGACGT TGTGCCGCTG GACGCCAACA ACCGTATTCT GACCTGGCAA GGGCTAAGTC GTATTCGTGC CGGGAAATGC CGTCCGGGAA TTAAAGCGTT GCTGGAGATA TCGAATCGCG ATCCGCAGCA GCTTGCCGCC AGTGATTTAG GCTTCGCGTT GGGGCCTCGC CTGAATGCCG CCGGCAGGCT GGATGATATG TCCGTTGGCG TGGCGTTACT GTTGTGCGAC AACCTCGGCG AAGCGCGTGT TCTGGCCAGC GAGCTGGATG CGCTTAACCA GACGCGCAAA GAAATAGAGC AGGGGATGCA GGCGGAAGCG CTTATCCTGT GCGAAAAGCT TGAGCGCAGT AGTGAAACGC TTCCGGGCGG TCTGGCGATG TATCATCCTG AATGGCACCA GGGCGTGGTC GGAATTCTGG CGTCGCGCAT TAAAGAGCGT TTTCACCGCC CGGTGATCGC CTTTGCGCCT GCGGGCGACG GCACGCTAAA AGGCTCAGGC CGATCGATTC AGGGGCTGCA TATGCGCGAT GCGCTGGAAC GGCTGGATAC CCTTTACCCT GATCTGATGA TCAAGTTCGG CGGCCATGCG ATGGCGGCGG GATTGTCGCT GGAAGAGCAT AAATTCGAGC AGTTTCAGCA ACGGTTTGGC GAGCTGGTGA CGGAATGGCT CGATCCTGCC CTGTTGCAAG GCGAGGTGAT CTCCGATGGT CCATTAAGCG CGGCGGAGAT GTCTATGGAA GTGGCGCAAC TGTTGCGGGA TGCCGGACCG TGGGGGCAAA TGTTCCCGGA ACCGTTATTC GATGGTCGTT TCCGTCTGCT ACAGCAGCGT CTGGTGGGCG AGCGTCACCT CAAGGTGATG GTGGAGCCTG TCGGCGGCGG CCCGCTGTTG GATGGCATCG CATTTAATAT TGATACGACC TGTTGGCCGG ATAACGGCGT GCGGGAGGTA GAACTGGCTT ATAAACTGGA CATTAACGAG TTTCGCGGCA ACCGTAGTTT ACAGATTATT ATCGATGATA TTTGGCCGCT ATGA
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Protein sequence | MKQQRQLRRR EADETAELPA DLPPLLRRLY ASRGVRSARE LERSVKGMLP WQQLSGIDNA VEILYNAFRE GIRIIVVGDF DADGATSTAL SVLGMRALGC DNISYLVPNR FEDGYGLSPE VVDQAKARGA QLIVTVDNGI SSHAGVAHAK TLGIPVIVTD HHLPGDTLPD AEAIINPNLR DCEFPSKSLA GVGVAFYLML ALRTFLRDKG WFDERNIAPP NLAELLDLVA LGTVADVVPL DANNRILTWQ GLSRIRAGKC RPGIKALLEI SNRDPQQLAA SDLGFALGPR LNAAGRLDDM SVGVALLLCD NLGEARVLAS ELDALNQTRK EIEQGMQAEA LILCEKLERS SETLPGGLAM YHPEWHQGVV GILASRIKER FHRPVIAFAP AGDGTLKGSG RSIQGLHMRD ALERLDTLYP DLMIKFGGHA MAAGLSLEEH KFEQFQQRFG ELVTEWLDPA LLQGEVISDG PLSAAEMSME VAQLLRDAGP WGQMFPEPLF DGRFRLLQQR LVGERHLKVM VEPVGGGPLL DGIAFNIDTT CWPDNGVREV ELAYKLDINE FRGNRSLQII IDDIWPL
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