Gene SeHA_C3266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3266 
Symbol 
ID6491520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3187343 
End bp3188446 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content48% 
IMG OID642743404 
Productsite-specific recombinase, phage integrase family 
Protein accessionYP_002047021 
Protein GI194447564 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.220935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGA CAGCTCGTCA GGTTGAAACT GCAAAACCTA AAGAGAAGCC CTACAAACTG 
GCTGATGGTG GTGGTCTTTA CCTGCTGGTT AATCCCAATG GCAAAAGATA CTGGCGTCTC
AAATACCGTT CACTAGGTAA AGAGAAACTG CTCGCTATTG GCGTTTACCC CGATGTTTTT
TTAGCTGAAG CCAGAAGCAA GCGAGAGGAT GCTAAAAGGA CATTAGCGGC TGGCAACGAT
CCTTCTCTTG AACGGAAAAT TGAGAAACTA AGTCGTCAAC AAGATGCAGA AAACTCTTTT
GAGGCTATCA CGCGGGAGTG GTATCAGCGT CGCTATGACC GCTGGTCTGT CTCCTGCCGC
GAAGAGATGC TGAGAACCTT TGAAAAGGAT GTGTTCCCTT ATATCGGTCA CCGGCCAATC
AAAGATATCA AGCCGATGGA GTTGCTTGCA GTTCTTTCAA AGATAGAAGC AAGAAGGGCA
ACTGAGAAGG TCCGTAAGGT TCGCCAGCGC TGTGGAGAGG TCTGGAAGTA TGCTGTTGTG
ACTGGCAGGG CCGAGTACAA TCCAGCACCA GATCTAGCCA GCGCCGTGAT TCCTCATGAG
AAAGAGCACT ATGCTTTTTT AACCCAAGAT GAATTGCCTG AGTTTCTTCG GACTCTCAAC
ACCTATGCTG GTAGTGTACT TGTTAAGATT GCGATGCAAT TGCTTATTTT AACGGGCGTA
AGGCTTGGGG AGTTGAGGCA AGCGGAGTGG CAGGAATTTG ATTTTGAGAA AAAGGTTTGG
AATGTACCAG CGGAACGCAT GAAAATGCGC CGCCCTCATC TGGTTCCGTT ATCAAGCCAG
GCAATTGACC TACTTAATCA GCTTAAACCC ATGACGGGAG CAGGAGCGTT GCTGTTCCCA
GGACGTAATA ATCCTAAGAA ACCGATGAGT GATATGGCAT TGACTGTGTT GGTCAGGCGT
ATCGGCTACG CTGGGCGTGT TACGGGGCAT GGATTCCGCC ACACGATGAG TACCATTTTG
CATGAGCAGG GATTTAATTC GGCCTGGATT GAGATACAAC TGGCTCATTT TATTTGCATT
CAGAATGGGA GTTACACCCT TTAG
 
Protein sequence
MKLTARQVET AKPKEKPYKL ADGGGLYLLV NPNGKRYWRL KYRSLGKEKL LAIGVYPDVF 
LAEARSKRED AKRTLAAGND PSLERKIEKL SRQQDAENSF EAITREWYQR RYDRWSVSCR
EEMLRTFEKD VFPYIGHRPI KDIKPMELLA VLSKIEARRA TEKVRKVRQR CGEVWKYAVV
TGRAEYNPAP DLASAVIPHE KEHYAFLTQD ELPEFLRTLN TYAGSVLVKI AMQLLILTGV
RLGELRQAEW QEFDFEKKVW NVPAERMKMR RPHLVPLSSQ AIDLLNQLKP MTGAGALLFP
GRNNPKKPMS DMALTVLVRR IGYAGRVTGH GFRHTMSTIL HEQGFNSAWI EIQLAHFICI
QNGSYTL