Gene SeHA_C3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3263 
Symbol 
ID6489075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3185406 
End bp3186371 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content46% 
IMG OID642743401 
ProductDeoR family transcriptional regulator 
Protein accessionYP_002047018 
Protein GI194449104 
COG category[K] Transcription 
COG ID[COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAG AGAACAAAAA TCCGAAGCTG CGCAACTACG ATCCTCGTTT TATCTACTCT 
CTTGTTGTTA AGCGTTATTT CTCTGAGATG AAGACGAAGG TAGAAATTGC AGAGGAGCTC
GGTCTGTCTC GCTTCAAAGT TGCACGCCTG ATTGATGAAG CCATTGCGCA AGAGTATGTA
AAATTTACCT TCCCTAAACA GCAAGCTCTG GACGAGGAAA TAGCGCAAAA TCTCTGTAAG
AAATACGGAT TGCAGGATGC AGTTGTGCTC TCCGTTTCCG AGTCCTGGTC TTCCCAGGAA
CAATTAAACG TCAAGCTGGG AGGGATAACG GCGACCTACT TGAGTGAGAT TCTTAAAGAG
GGTATGAAGT TTGGTCTGGC CTGGGGGCGG GTTCTTTCAA GTACGGTGAG TCAACTGACG
ACATTACCTG TTCTGGATGT GGTTCAGCTT TCTGGCGTTC ATCCTGGTAT TGAATTTAGT
CAGGGACCGA TTGATCTAAT ACACAAAGTT GCCGCAATTT CCCACGGAAG AGCGCACCCG
ATGTATGTAC CCATGTGGGT GGATGACGAA AGTTTAGCCC AGAAACTCGC TGACGATCAG
GCTGTTCAGG ATACGCAAAA ATTTTACTCA AATATGGATG TCGTAATTAC AGGGATTGGG
GCCTGGAAAA CAGGCTCTTC CAGTCTATGC GATATATTCC CTGAAGCGTG GCGTGAGGCT
TTAATAAGCC AGGACATTAC TGCTGATGTA TGCGTAACAC TGGTAAATAG CAAAGGGGAA
ATTCTGGATA GTCCGCTGAA CCGCCTGGGT TTCGGCATTA CGACAGATCA ATTGCGTGCC
ACAAAGAAAC TGATTGGTGT GGCTGGAGGG GACGAAAAAT ATGAAGGTAT AGTTGCCTCT
CTCAAATCAG GTCTTCTGAA TGTGCTGATC ACTGACTTTG ATACGGCTAT TAAACTGCTG
GATTAA
 
Protein sequence
MPKENKNPKL RNYDPRFIYS LVVKRYFSEM KTKVEIAEEL GLSRFKVARL IDEAIAQEYV 
KFTFPKQQAL DEEIAQNLCK KYGLQDAVVL SVSESWSSQE QLNVKLGGIT ATYLSEILKE
GMKFGLAWGR VLSSTVSQLT TLPVLDVVQL SGVHPGIEFS QGPIDLIHKV AAISHGRAHP
MYVPMWVDDE SLAQKLADDQ AVQDTQKFYS NMDVVITGIG AWKTGSSSLC DIFPEAWREA
LISQDITADV CVTLVNSKGE ILDSPLNRLG FGITTDQLRA TKKLIGVAGG DEKYEGIVAS
LKSGLLNVLI TDFDTAIKLL D