Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3250 |
Symbol | |
ID | 6490151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3175759 |
End bp | 3176295 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642743388 |
Product | outer membrane protein |
Protein accession | YP_002047005 |
Protein GI | 194450326 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0628701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.157037 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAA TGCTATTAGC CGGAAGTGCC GGTATTGTTC TGCTGTCTGC TGCAGCCAGT CCGGTATGGG CAGACGATAA TGCCAGTACA TTTTCACTTG GATACGCCCA GTCCCATACT AATCACGCCG GGACGTTGCG TGGGGTTCGG CTGGCAAACA ACTATGAAAT GTCACCGGAC TGGGGGCTGA CAACCTCATT TGCCTGGCTA AATGGAAGCC AGCGCTATTC CGATGAAAGC AGTAATGGTC GTGTAACAAC CCGTTATTAC TCCCTGCTTG CAGGCCCCTC ATGGAAAATA AATAACCAGT TAAGTCTGTA TAGTCAAGTG GGTCCCGTAT TATTGCATCA GCGTGATCAC GGGATAAATG AGTCTGACAG TAAGGTCGGA TATGGTTATT CTGCTGGCGT GGCTTATACC CCGGTCAGTA ATGTCGCTAT AACTCTGGGT TATGAGGGCG CGGATTTTGA TGCTACCCAT AACAGCGGAA GCCTTAATAG CAATGGTTTT AATCTTGGCG TGGGTTACCG GTTCTGA
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Protein sequence | MNKMLLAGSA GIVLLSAAAS PVWADDNAST FSLGYAQSHT NHAGTLRGVR LANNYEMSPD WGLTTSFAWL NGSQRYSDES SNGRVTTRYY SLLAGPSWKI NNQLSLYSQV GPVLLHQRDH GINESDSKVG YGYSAGVAYT PVSNVAITLG YEGADFDATH NSGSLNSNGF NLGVGYRF
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