Gene SeHA_C3248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3248 
Symbol 
ID6491135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3173780 
End bp3174361 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content53% 
IMG OID642743386 
Productfimbrial protein 
Protein accessionYP_002047003 
Protein GI194450455 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.747356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.0628332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATA AAATAATACT TGCCATGGCG GCTGCCGGTA TGATGTATGG CGCTTCTGTA 
TATGCAGTCG ATCCACCAAC AGCAGGCCCG TTCGGCTCAG GTAAAATTAC CTTTACTGGT
ACCATCACCA ACTCCCCCTG TGATATCGCA CCGGGCGACG ATGCGATCAC CGTTCCGTTT
GGACAGATTT CTTACCGTAA ACTGAATACC GCCGATGCAA CCACGGACTC AAAACCGTTC
ACCATTCATC TGCAGAACTG TGCTTTCGAT CCGAATATCC CGGACACAGC TGGCTCCGCA
GGGAAAATGT CCAAAGTGAC CGTCTCTTTC TCTGGCGGAG CCAATGTCGC GAAAAAGGCT
TACACCACCA GCGGCAGCGC ACAGCATGTT GGTGTCCAGC TACTGAAGAG TGACAACACC
GCAATTATCG AGCCCAACAC CCAGATGCCG GAGGTCGACG CTCAGCAACT GCAGGCCGGA
AACAACGAAC TCAACTTCTA TGCCCGGCTA ATAGCACTGG ATAATGGCGT CACGCCCGGT
GACTTCACCG CATCTGTCAC CTACACCCTG AAATACCTGT GA
 
Protein sequence
MRNKIILAMA AAGMMYGASV YAVDPPTAGP FGSGKITFTG TITNSPCDIA PGDDAITVPF 
GQISYRKLNT ADATTDSKPF TIHLQNCAFD PNIPDTAGSA GKMSKVTVSF SGGANVAKKA
YTTSGSAQHV GVQLLKSDNT AIIEPNTQMP EVDAQQLQAG NNELNFYARL IALDNGVTPG
DFTASVTYTL KYL