Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3248 |
Symbol | |
ID | 6491135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3173780 |
End bp | 3174361 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642743386 |
Product | fimbrial protein |
Protein accession | YP_002047003 |
Protein GI | 194450455 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.747356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.0628332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTAATA AAATAATACT TGCCATGGCG GCTGCCGGTA TGATGTATGG CGCTTCTGTA TATGCAGTCG ATCCACCAAC AGCAGGCCCG TTCGGCTCAG GTAAAATTAC CTTTACTGGT ACCATCACCA ACTCCCCCTG TGATATCGCA CCGGGCGACG ATGCGATCAC CGTTCCGTTT GGACAGATTT CTTACCGTAA ACTGAATACC GCCGATGCAA CCACGGACTC AAAACCGTTC ACCATTCATC TGCAGAACTG TGCTTTCGAT CCGAATATCC CGGACACAGC TGGCTCCGCA GGGAAAATGT CCAAAGTGAC CGTCTCTTTC TCTGGCGGAG CCAATGTCGC GAAAAAGGCT TACACCACCA GCGGCAGCGC ACAGCATGTT GGTGTCCAGC TACTGAAGAG TGACAACACC GCAATTATCG AGCCCAACAC CCAGATGCCG GAGGTCGACG CTCAGCAACT GCAGGCCGGA AACAACGAAC TCAACTTCTA TGCCCGGCTA ATAGCACTGG ATAATGGCGT CACGCCCGGT GACTTCACCG CATCTGTCAC CTACACCCTG AAATACCTGT GA
|
Protein sequence | MRNKIILAMA AAGMMYGASV YAVDPPTAGP FGSGKITFTG TITNSPCDIA PGDDAITVPF GQISYRKLNT ADATTDSKPF TIHLQNCAFD PNIPDTAGSA GKMSKVTVSF SGGANVAKKA YTTSGSAQHV GVQLLKSDNT AIIEPNTQMP EVDAQQLQAG NNELNFYARL IALDNGVTPG DFTASVTYTL KYL
|
| |