| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3247 |
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| Symbol | |
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| ID | 6491234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | - |
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| Start bp | 3171171 |
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| End bp | 3173660 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642743385 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_002047002 |
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| Protein GI | 194448641 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.239063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.0404863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA CCCGGCTTGC CATTCTGATT ACCCTGACAT TTTCCGTCCT GAAGTCGCAG
GCCACGGAGT TCAATGCCAG CCTGCTGGAC AGCGGGAACC TGTCCAACGT GGACCTCACG
GCCTTCAGCC GCGAGGGGTA TGTGGCGCCC GGTAACTATA TTCTCGATAT CTGGCTCAAT
GACCAGCCGG TACGGGAACA GTATCCGGTC AGAGTTGTAC CGGTTGCCGG ACGCGACGCG
GCCGTCATCT GTGTGACAAC AGACATGGTG GCCATGCTGG GTCTTAAGGA TAAGATTATT
CATGGCCTGA AACCCGTTAC CGGTATCCCG GACGGGCAAT GCCTTGAGCT GCGCTCCGCT
GACAGTCAGG TACGGTACAG CGCTGAAAAT CAGCGTCTGA CCTTCATTAT CCCCCAAGCC
TGGATGCGTT ATCAGGACCC GGACTGGGTG CCTCCTTCAC GCTGGAGCGA CGGCGTCACC
GCCGGCCTGC TCGATTACAG CCTGATGGCC AACCGCTATA TGCCGCAGCA GGGGGAGACC
TCTACCAGCT ACAGCCTCTA CGGCACCGCC GGGTTTAATC TCGGCGCCTG GCGGTTGCGG
AGCGATTACC AGTACAGCCG TTTTGACAGT GGGCGGGGCG CATCACAGTC CGATTTTTAT
CTGCCGCAGA CGTATCTGTT CCGTGCCCTG CCAGCACTGC GCTCAAAACT GACGCTCGGA
CAGACGTACC TCAGCTCCGC TATTTTTGAC TCCTTCCGCT TTGCCGGGCT CACTTTGGCC
AGCGATGAGC GCATGCTGCC GCCCTCTCTT CAGGGGTATG CCCCGAAAAT CAGCGGCATT
GCGAACAGTA ATGCACAGGT TACCGTCAGC CAGAATGGAC GCATTCTGTA CCAGACCCGG
GTGTCGCCGG GGCCTTTTGA GCTTCCCGAC CTGAGCCAGA ATATCAGCGG CAACCTGGAT
GTCAGCGTCC GGGAAAGCGA CGGTAGCGTC CGGACCTGGC AGGTCAACAC GGCCAGCGTC
CCCTTTATGG CACGCCAGGG ACAGGTTCGC TATAAGGTGG CCGCCGGACG TCCGCTGTAC
GGCGGGACGC ATAACAACAG CACGGTCAGC CCTGACTTTC TGCTCGGGGA GGCCACCTGG
GGAGCATTTA ACAACACGTC GCTGTATGGC GGCCTCATTG CCTCCACCGG CGACTACCAG
TCCGCGGCGC TCGGGATCGG CCAGAATATG GGGCTGCTGG GCGCTCTGTC TGCGGACGTC
ACCCGCTCAG ATGCGCGGTT GCCGCATGGG AAGAAGCAGT CCGGTTACAG CTACCGTATC
AACTATGCCA AAACGTTTGA TAAAACCGGC AGTACCCTGG CGTTCGTCGG ATACCGCTTC
TCGGACCGCC ATTTTCTGTC CATGCCGGAG TACCTGCAGC GTCGGGCCAC CGACGGCGGC
GATGCATGGC ATGAAAAACA AAGCTACACC GTGACTTACA GCCAGTCCGT TCCGGTACTC
AATATGAGCG CGGCCCTCTC GGTAAGCCGG CTCAATTACT GGAATGCGCA GTCCAACAAT
AACTACATGC TCAGCTTCAA CAAAGTGTTC AGTCTCGGCG ACCTTCAGGG GCTCTCGGCC
TCGGTGTCGT TTGCCCGTAA CCAGTACACC GGCGGGGGGA GCCAGAACCA GGTCTACGCC
ACCATCAGTA TCCCGTGGGG CGACAGCCGC CAGGTGAGCT ACAGCGTGCA GAAGGATAAC
CGGGGCGGCC TGCAGCAGAC CGTGAATTAC AGCGATTTCC ATAACCCGGA TACCACATGG
AACATCAGCG CCGGTCATAA CCGCTATGAC ACCGGCAGTA ACAGCAGCTT TAGCGGCAGC
GTGCAGAGCC GTCTGCCGTG GGGTCAGGCG GCAGCGGACG CCACCCTGCA GCCCGGACAG
TACCGCAGCC TGGGCCTGAG CTGGTACGGC TCGGTGACCG CCACCGCCCA CGGCGCCGCC
TTCAGCCAGT CGATGGCCGG GAATGAGCCT CGCATGATGA TAGATACCGG AGACGTGGCC
GGTGTGCCGG TGAACGGCAA CAGCGGGGTG ACCAACCGCT TCGGGGTGGG CGTGGTAAGC
GCCGGCAGCA GCTATCGGCG CAGCGATATT TCGGTTGATG TGGCCGCCCT GCCGGAGGAC
GTGGACGTCA ACAGCTCCGT CATTAGCCAG GTGCTGACGG AGGGCGCGGT GGGCTACCGG
AAAATTGACG CCAGCCAGGG GGAGCAGGTG CTCGGTCATA TCCGACTGGC TGATGGCGCC
AGTCCACCGT TTGGCGCTCT GGTAGTGTCC GGGAAAAGCG GCAGAACCGC GGGGATGGTC
GGAGATGACG GTTTGGTCTA CCTGACAGGC CTCAGCGGGG AAGACCGCCG GACCCTGAAT
GTGTCCTGGG ATGGCCGGGT GCAGTGCAAA CTCACCCTGC CGGAAACGGT GACACTCAGT
CGGGGGCCGC TGTTACTGCC CTGCAGATAA
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| Protein sequence | MKITRLAILI TLTFSVLKSQ ATEFNASLLD SGNLSNVDLT AFSREGYVAP GNYILDIWLN
DQPVREQYPV RVVPVAGRDA AVICVTTDMV AMLGLKDKII HGLKPVTGIP DGQCLELRSA
DSQVRYSAEN QRLTFIIPQA WMRYQDPDWV PPSRWSDGVT AGLLDYSLMA NRYMPQQGET
STSYSLYGTA GFNLGAWRLR SDYQYSRFDS GRGASQSDFY LPQTYLFRAL PALRSKLTLG
QTYLSSAIFD SFRFAGLTLA SDERMLPPSL QGYAPKISGI ANSNAQVTVS QNGRILYQTR
VSPGPFELPD LSQNISGNLD VSVRESDGSV RTWQVNTASV PFMARQGQVR YKVAAGRPLY
GGTHNNSTVS PDFLLGEATW GAFNNTSLYG GLIASTGDYQ SAALGIGQNM GLLGALSADV
TRSDARLPHG KKQSGYSYRI NYAKTFDKTG STLAFVGYRF SDRHFLSMPE YLQRRATDGG
DAWHEKQSYT VTYSQSVPVL NMSAALSVSR LNYWNAQSNN NYMLSFNKVF SLGDLQGLSA
SVSFARNQYT GGGSQNQVYA TISIPWGDSR QVSYSVQKDN RGGLQQTVNY SDFHNPDTTW
NISAGHNRYD TGSNSSFSGS VQSRLPWGQA AADATLQPGQ YRSLGLSWYG SVTATAHGAA
FSQSMAGNEP RMMIDTGDVA GVPVNGNSGV TNRFGVGVVS AGSSYRRSDI SVDVAALPED
VDVNSSVISQ VLTEGAVGYR KIDASQGEQV LGHIRLADGA SPPFGALVVS GKSGRTAGMV
GDDGLVYLTG LSGEDRRTLN VSWDGRVQCK LTLPETVTLS RGPLLLPCR
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