Gene SeHA_C3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3238 
Symbol 
ID6488627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3163599 
End bp3164462 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content55% 
IMG OID642743376 
ProductLysR family transcriptional regulator 
Protein accessionYP_002046993 
Protein GI194450479 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.00156229 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTTACT CACCTGAAGC GTTAATGGCA TTTGTTGAGA CCGTCTCTTG CGGTTCGTTT 
TCTGCGGCGG CGCGCCGCCT GCGTAAAAGC CAGTCCACCA TTAGTACCGC CATTGCGCAT 
CTGGAGGCGG ATCTGGGATT TTCATTATTT GATCGATCTT CGCGCCAGCC CGTTCTGACC 
GAAGAAGGAA AACGGGTGCT TAGCTATGTT CAGGCTATTT TATCGGCGAG CGACCGCCTG 
GATGAGGTGG CGCTGACGTT ATCCGGCGAG ACGGAGGCAA GGCTCACGTT CGTCCTCTCT 
GATACCCTGC ACCCTGACAG TCTGGAAGAG TTAATGGCGC AGTTTGATCG TCAATTTCCG 
CATACCGAGT TTGAATGTTT GATCGGAGAA AATGATGATG TCATCGACCT GCTGCAAAAA 
GGGCGCGCCC AGATAGGTCT GATTGAAGCG CGTGATGACT ATCCCACAGA CATTGGCGCG 
ACGCGTCTGC CTGTTCAAAG CTGGATGGGA GTTTATGTGG CGACCACGCA TCCGTTGGCG 
TCGCAGACGA ACCTGCAATG GGAACAACTG CATACCTGGC GCGAGCTGCG TCTGAATACC 
TACCTTGACT CTAACGCCAA CATTACGCGC GGCCCGGCCT GGTCAGCGCC AAACTATTTA 
TTGCTGTTGA GCATGGCGGT TCAGGGATTT GGCTGGTGCG TATTGCCCTG CGCGCTGGTG 
GAAGAGTTTG CGGCGGAAAA ACCGCTGGCG CAGCTGGATG TTCCTGGCTG GCCGAGGGCG 
ATTGCTATTG ATTTGCTGTG GAACAAGAAG ACGCCGCCCG GAACGGCGGG GAACTGGCTT 
CGCTACCATT TGCAGCAGAA ATAA
 
Protein sequence
MRYSPEALMA FVETVSCGSF SAAARRLRKS QSTISTAIAH LEADLGFSLF DRSSRQPVLT 
EEGKRVLSYV QAILSASDRL DEVALTLSGE TEARLTFVLS DTLHPDSLEE LMAQFDRQFP 
HTEFECLIGE NDDVIDLLQK GRAQIGLIEA RDDYPTDIGA TRLPVQSWMG VYVATTHPLA 
SQTNLQWEQL HTWRELRLNT YLDSNANITR GPAWSAPNYL LLLSMAVQGF GWCVLPCALV 
EEFAAEKPLA QLDVPGWPRA IAIDLLWNKK TPPGTAGNWL RYHLQQK