Gene SeHA_C3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3228 
Symbol 
ID6488292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp3154304 
End bp3155323 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content57% 
IMG OID642743366 
ProductHTH-type transcriptional regulator AscG 
Protein accessionYP_002046983 
Protein GI194448415 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.000212172 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACAA TGCTGGATGT TTCCCGCCAT GCGGGCGTAT CAAAGGCCAC CGTCTCACGA 
GTGCTGAATG GGACGGGGCA GGTAAAAGAA AGCACGCGCC AGAAAGTGTT TACGGCGATG 
CAGGCTCTGG ACTATCGCCC CAACCTGCTG GCACGCTCGC TGGCAAATCG CACCAGCAAC 
AGCATCGGTC TGGTCGTCTC TACGTTTGAC GGCTTCTATT TTGGCAGTTT GTTGCGCCGG 
GCGTCGCGCC AGGCGGAGTT TCATAACAAG CAGTTGATCG TCACCGATGG TCACGATACG 
CCGGAACGAG AGCAGAAAGC CGTACAAATG TTGGCCGACA GACAGTGCGA CGCTATTATT 
CTTTACACTC GCTATATGGA TGAGCCGGCG ATTTTGTCGT TGATTGACGC CACGGAAATG 
CCGCTGGTGA TTATTAATCG CAACGTCACT CAGGCCCGCG ATCGCGCTAT TTTCTTCGAG 
CAGGAGACGG CGGCATTCCA GGCGGTGGAA TACCTGATTA CGCAGGGCCA TCGCGATATC 
GCCTGTATTA CGCTGCCTGT TCATACTCCC ACTGGCACAT CACGCGTAGC GGGTTATCGC 
AAGGCGCTGG AAAAGTATGG TATTCCCTGG CAACCGGCAA AAGTGAAATA CGGCGATTAC 
ACGCTGACGC GCGGCTATGA CGCCTGCCGG GAATTGCTGG AAGAAGGCGT CACGTTTAGC 
GCGCTATTCG CCTGTAATGA TGACACGGCG CTGGGCGCGG CAAAAGCGCT GCGCCAGGCC 
GGATTACGCA TCCCGCAGGA TGTGTCGCTG TTTGGTTTTG ACGATGCGCC GGGCGCAACC 
TGGCTTGAAC CGGGGCTTTC AACAGTCTAT TTACCCATCG AGGATATGAT AGCCACCGCG 
ATCGATCAGG CCGTTCGTCT GGCGAACAGC GAGCCGGTCG CCCCGATCCC ACCCTTTACC 
GGCACGCTGA TTCTGCGCGA GTCCGTCGCC GCAGGCCCGT TTTTTCAACG TCCGGCCTAA
 
Protein sequence
MATMLDVSRH AGVSKATVSR VLNGTGQVKE STRQKVFTAM QALDYRPNLL ARSLANRTSN 
SIGLVVSTFD GFYFGSLLRR ASRQAEFHNK QLIVTDGHDT PEREQKAVQM LADRQCDAII 
LYTRYMDEPA ILSLIDATEM PLVIINRNVT QARDRAIFFE QETAAFQAVE YLITQGHRDI 
ACITLPVHTP TGTSRVAGYR KALEKYGIPW QPAKVKYGDY TLTRGYDACR ELLEEGVTFS 
ALFACNDDTA LGAAKALRQA GLRIPQDVSL FGFDDAPGAT WLEPGLSTVY LPIEDMIATA 
IDQAVRLANS EPVAPIPPFT GTLILRESVA AGPFFQRPA