Gene SeHA_C3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3214 
SymbolthyA 
ID6489890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3140655 
End bp3141449 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content52% 
IMG OID642743354 
Productthymidylate synthase 
Protein accessionYP_002046971 
Protein GI194448836 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.0238211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT ATTTAGAACT GATGCAAAAA GTGCTGGATG AAGGCACACA GAAAAACGAC 
CGTACCGGCA CCGGCACGCT TTCCATTTTT GGCCATCAGA TGCGTTTTAA CCTGCAGGAA
GGCTTTCCTC TGGTGACGAC AAAACGCTGC CATTTACGTT CAATTATTCA CGAACTGCTA
TGGTTTTTGC AGGGCGATAC CAACATCGCT TACCTGCACG AAAATAATGT CACCATCTGG
GACGAATGGG CCGATGAGAA CGGCGATTTA GGCCCGGTTT ATGGTAAGCA GTGGCGTGCA
TGGCCAACAC CGGATGGCCG CCATATCGAT CAGATCGCCA CGGTCTTAAG CCAGCTTAAA
AACGACCCGG ACTCTCGCCG TATTATCGTT TCTGCGTGGA ACGTCGGCGA GCTGGATAAG
ATGGCGCTGG CGCCGTGTCA CGCCTTTTTC CAGTTTTATG TCGCAGATGG AAAACTCTCC
TGTCAGCTTT ATCAGCGCTC CTGCGATGTG TTCCTCGGTC TGCCGTTCAA CATTGCCAGC
TACGCGTTAC TGGTGCATAT GATGGCGCAA CAGTGCGACC TGGACGTCGG CGATTTTGTC
TGGACCGGCG GCGACACGCA CCTGTACAGC AACCATATGG AGCAGACGCA CCTGCAATTA
AGCCGTGAAC CGCGCGCGCT GCCGAAATTG GTCATTAAGC GTAAACCCGA TTCGCTTTTT
GACTACCGGT TCGATGATTT CGAAATTGAA GGCTATGATC CGCACCCCGG TATTAAAGCG
CCGGTCGCTA TCTAA
 
Protein sequence
MKQYLELMQK VLDEGTQKND RTGTGTLSIF GHQMRFNLQE GFPLVTTKRC HLRSIIHELL 
WFLQGDTNIA YLHENNVTIW DEWADENGDL GPVYGKQWRA WPTPDGRHID QIATVLSQLK
NDPDSRRIIV SAWNVGELDK MALAPCHAFF QFYVADGKLS CQLYQRSCDV FLGLPFNIAS
YALLVHMMAQ QCDLDVGDFV WTGGDTHLYS NHMEQTHLQL SREPRALPKL VIKRKPDSLF
DYRFDDFEIE GYDPHPGIKA PVAI