Gene SeHA_C3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3198 
SymbolrarD 
ID6487619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3120516 
End bp3121430 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content42% 
IMG OID642743340 
Producthypothetical protein 
Protein accessionYP_002046959 
Protein GI194451736 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID[TIGR00688] rarD protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAAAT ATCTGCGTAG CGGTACCATG TTTGTGGTAC TGGCATTTAT ATTATGGGGG 
TTAACACCTT TATATTATCA ATATTTATCA GGGGGAAATC TCGCACAAAT ATTGATATAC
CGGGTGTTCT GGTCAATTCC ATTATTACTG GCAGTAAGAT TGTTATTTCG GCAGCGAACG
CGATTTCATG ATGCCTGGAA AGATAAAAAA TCTTTTTTCT TCTGCATGAT CGCCGGACTT
TTGATGATTG TCTCATGGTC ATCTTTTATT TATGCGCTAA CCCATCATCT GGTACTTGAT
GCCAGCCTCG GCTATTTTAT CAACCCGCTA TTTGTTATTG CGCTGGGATG CATTTTTCTT
AAAGAAAAAC TGTCGTTGTT TCAGGCCATC GCCGTTTTTT CTGGTGTCTG TGGCCTGACT
TTTCAAATTA TCATGCTACG GCATTTCCCG GCGCTGGCGC TAACCATGGG ATTATCATTT
GCGCTATATG GCCTGGCGCG AAAGTTTATA CATTATGATG TGATGACATC GATAACGATT
GAAACATTAT GGGCATTGCC TGTCTCACTA TTAATTTTTC TCTTTAGCGA TAGCGGACCA
ATTATATCCG CTAATACTCC TTTCTTTTTG TATGTCATGA CGGCGCCAGT GACGATCATT
CCACTGGTAT TATTTGCCAT CGCGTTAAAT CACACCTCGT TGATTGTCAC CGGACTGGCG
CAATATATAG AGCCGTCTTT ACAGTTCTTA CTTGCCATTA TGATATTTGG CGAGCACATT
AATTACGCGG AACTGCTCTG CTTTTGTGCA GTATGGTTCG GGTTGTTTCT ATGCATATCT
GAAAATTTAT ATTCCCATTA TCTCCGCGCC CGTCTGAAAC CGGTGTTCGG CAGGGTACAG
CGCTTCTTTC GCTAA
 
Protein sequence
MEKYLRSGTM FVVLAFILWG LTPLYYQYLS GGNLAQILIY RVFWSIPLLL AVRLLFRQRT 
RFHDAWKDKK SFFFCMIAGL LMIVSWSSFI YALTHHLVLD ASLGYFINPL FVIALGCIFL
KEKLSLFQAI AVFSGVCGLT FQIIMLRHFP ALALTMGLSF ALYGLARKFI HYDVMTSITI
ETLWALPVSL LIFLFSDSGP IISANTPFFL YVMTAPVTII PLVLFAIALN HTSLIVTGLA
QYIEPSLQFL LAIMIFGEHI NYAELLCFCA VWFGLFLCIS ENLYSHYLRA RLKPVFGRVQ
RFFR