| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3196 |
|---|
| Symbol | csdE |
|---|
| ID | 6491096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 3119800 |
|---|
| End bp | 3120243 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642743338 |
|---|
| Product | cysteine desulfurase, sulfur acceptor subunit CsdE |
|---|
| Protein accession | YP_002046957 |
|---|
| Protein GI | 194447363 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2166] SufE protein probably involved in Fe-S center assembly |
|---|
| TIGRFAM ID | [TIGR03391] cysteine desulfurase, sulfur acceptor subunit CsdE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.78287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 83 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACC CTCTTTATAC CGGACACCCG TTCGGCACAA CGGTAACGGA AGAGACGTTA
CGCGCTATCT TTCTCCCGCT GACCCAGTGG GAGGATAAAT ATCGTCAGTT GATTCTGTTA
GGAAAACAGC TCCCCGCTCT GCCGGATGAA TGCAAAGCGC AGGCGAAGGA GATAGCCGGC
TGCGAGAATC GTGTCTGGCT GGGCTTTACC CGATCAGATA ACGGAACAAT GCACTTTTTC
GGCGACAGTG AGGGGCGGAT TGTCCGCGGC CTGCTGGCGG TATTGCTCAC CGCAGTGGAA
GGAAAAAACG CCGCCGAATT ACAGGCTCGT TCACCGCTGG CGCTGTTTGA TGAGCTGGGT
TTACGCGCCC AGCTTAGCGC CTCACGCAGT CAGGGGCTGA ACGCGCTGAG CGAAGCGATT
GTTGCCGCAA CGCATAAGCG TTGA
|
|---|
| Protein sequence | MTNPLYTGHP FGTTVTEETL RAIFLPLTQW EDKYRQLILL GKQLPALPDE CKAQAKEIAG
CENRVWLGFT RSDNGTMHFF GDSEGRIVRG LLAVLLTAVE GKNAAELQAR SPLALFDELG
LRAQLSASRS QGLNALSEAI VAATHKR
|
|---|
| |