Gene SeHA_C3189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3189 
Symbol 
ID6492135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3114635 
End bp3115345 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID642743332 
ProductDNA-binding transcriptional activator FucR 
Protein accessionYP_002046951 
Protein GI194447897 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGG CACGCCAACA AGCGATAGTC GATCTGCTGA TCAATCATAA AAGTCTGACC 
ACCGAAGCGC TGGCCACCCG GCTTAACGTC AGTAAAGAGA CCATCCGCCG CGATCTCAGT
GAACTACAGA CGCAGGGAAA AGTGCTGCGT AATCACGGAC GAGCTAAATA TATTCATCGT
GAAAATCAGG ACAGCGGCGA TCCATTCCAT ATCCGCCTGA AAAGCCATTA TGCGCATAAA
GCCGATATTG CCCGTGAAGC GTTAGCGTGG ATAGAAGAAG GAATGACGAT TGCGTTGGAT
GCCAGTTCAA CCTGCTGGTA TCTGGCCCGC CAGTTGCCGG ATATTCCCAT TCAGGTTTTT
ACCAATAGCC ATCCTATCTG TCAGGAGCTG GGAAAACGCG AACGCATTGC GCTGATAAGT
TCCGGCGGCC AGCTTGAACG TAAATATGGC TGTTATGTTA ATCCGTCGCT TATCTCACAG
CTAAAATCGC TTGATATCGA TCTGTTCATC TTTTCCTGTG AGGGGATCGA CGGCGGCGGC
GATCTGTGGG ACTCCAATGC GATCAACGCC GATTTTAAAT CTATCCTGCT CAGACGCGCC
TCGCAGTCTT TATTATTGAT TGATAAAAGT AAATTTAATC GTTCAGGAGA GGCGCGCATC
GGCCATCTGG ATGACGTGAC GCATATTGTT TCAGATGCGC CGCAGTCATA G
 
Protein sequence
MKAARQQAIV DLLINHKSLT TEALATRLNV SKETIRRDLS ELQTQGKVLR NHGRAKYIHR 
ENQDSGDPFH IRLKSHYAHK ADIAREALAW IEEGMTIALD ASSTCWYLAR QLPDIPIQVF
TNSHPICQEL GKRERIALIS SGGQLERKYG CYVNPSLISQ LKSLDIDLFI FSCEGIDGGG
DLWDSNAINA DFKSILLRRA SQSLLLIDKS KFNRSGEARI GHLDDVTHIV SDAPQS