Gene SeHA_C3186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3186 
SymbolfucI 
ID6489506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3110859 
End bp3112634 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content57% 
IMG OID642743329 
ProductL-fucose isomerase 
Protein accessionYP_002046948 
Protein GI194450773 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2407] L-fucose isomerase and related proteins 
TIGRFAM ID[TIGR01089] L-fucose isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.290864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCAGCTTACC GAAAATCGGT ATCCGCCCGG TGATTGATGG ACGTCGTATG 
GGCGTACGCG AGTCGCTCGA AGAGCAAACC ATGAACATGG CGAAAGCGAC GGCGGTGCTC
ATCACCGAGA AAATCCGCCA CGCCTGTGGG GCACAGGTGG AGTGCGTCAT TGCGGATACC
TGTATTGCCG GAATGGCGGA ATCCGCCGCC TGTGAAGAAA AATTCAGTAG CCAGAACGTG
GGCGTGACCA TTACCGTTAC GCCGTGCTGG TGCTATGGCA GCGAAACCAT TGATATGGAC
CCGATGCGTC CGAAAGCCAT CTGGGGCTTT AACGGCACAG AGCGTCCTGG GGCGGTTTAC
CTTGCCGCGG CGCTGGCGGC GCACAGCCAG AAAGGCATTC CGGCGTTCTC CATTTATGGC
CATGACGTGC AGGATGCCGA CGATACCTCC ATTCCTGCCG ACGTCGAAGA AAAACTGCTG
CGTTTTGCGC GGGCAGGGTT AGCGGTAGCC AGTATGAAAG GCAAAAGCTA CCTCTCCGTC
GGCGGCGTGT CGATGGGGAT CGCGGGTTCC ATTGTCGATC ATAACTTCTT TGAATCCTGG
CTGGGCATGA AGGTGCAAGC GGTAGATATG ACCGAGCTGC GCCGCCGTAT CGATCAAAAA
ATTTATGATG AGGCCGAACT GGAGATGGCG CTGGCGTGGG CGGATAAAAA CTTCCGCTAC
GGCGAAGATC AGAACGCCTC GCAGTATAAG CGCAATGAAG CCCAGAACCG CGCGGTGCTA
AAAGAGAGCC TGCTGATGGC GATGTGTATT CGCGATATGA TGCAGGGCAA CAAGACTCTG
GCGGGCAAAG GGTTAGTTGA AGAATCGCTG GGCTACAACG CCATTGCCGC CGGCTTTCAG
GGCCAGCGCC ACTGGACCGA TCAATACCCG AACGGCGATA CCGCCGAAGC GCTGCTCAAT
AGTTCTTTTG ACTGGAACGG CGTACGCGAA CCGTTTGTCG TCGCCACCGA AAATGACAGT
CTGAACGGCG TAGCGATGCT GTTTGGCCAT CAACTCACCG GTACCGCGCA GATATTCGCC
GACGTGCGAA CCTACTGGTC GCCGGAAGCC GTAGAACGCG TCACCGGCCA GGCGCTTAGC
GGACTGGCGG AGCACGGCAT TATTCACCTG ATTAATTCCG GTTCTGCCGC TCTGGACGGT
GCCTGTAAAC AGCGCGACAG CGAAGGCAAG CCGACCATGA AACCACACTG GGAAATCAGC
CAACAAGAGG CGGATGCGTG TCTGGCGGCC ACCGAATGGT GCCCGGCGAT TCACGAATAC
TTCCGCGGCG GCGGCTACTC ATCCCGTTTC CTGACCGAAG GCGGCGTGCC ATTCACCATG
ACCCGCGTGA ATATCATCAA AGGTCTGGGA CCAGTACTGC AAATCGCCGA GGGCTGGAGC
GTCGAACTGC CGAAAGCGAT GCACGATCAG CTTGATGCCC GCACCAACTC TACCTGGCCT
ACTACCTGGT TTGCGCCGCG TCTTACCGGC AAAGGCCCGT TTACCGATGT CTATTCGGTG
ATGGCGAACT GGGGCGCTAA CCACGGCGTA CTCACCATCG GCCATGTAGG GGCAGACTTT
ATTACTCTCG CCGCGATGCT GCGTATCCCG GTATGTATGC ACAACGTGGA GGAGGCGAAG
ATCTACCGTC CTTCCGCCTG GGCGGCTCAC GGTATGGATA TCGAAGGCCA GGATTATCGC
GCCTGCCAGA ATTATGGCCC GCTGTATAAA CGTTAA
 
Protein sequence
MKKISLPKIG IRPVIDGRRM GVRESLEEQT MNMAKATAVL ITEKIRHACG AQVECVIADT 
CIAGMAESAA CEEKFSSQNV GVTITVTPCW CYGSETIDMD PMRPKAIWGF NGTERPGAVY
LAAALAAHSQ KGIPAFSIYG HDVQDADDTS IPADVEEKLL RFARAGLAVA SMKGKSYLSV
GGVSMGIAGS IVDHNFFESW LGMKVQAVDM TELRRRIDQK IYDEAELEMA LAWADKNFRY
GEDQNASQYK RNEAQNRAVL KESLLMAMCI RDMMQGNKTL AGKGLVEESL GYNAIAAGFQ
GQRHWTDQYP NGDTAEALLN SSFDWNGVRE PFVVATENDS LNGVAMLFGH QLTGTAQIFA
DVRTYWSPEA VERVTGQALS GLAEHGIIHL INSGSAALDG ACKQRDSEGK PTMKPHWEIS
QQEADACLAA TEWCPAIHEY FRGGGYSSRF LTEGGVPFTM TRVNIIKGLG PVLQIAEGWS
VELPKAMHDQ LDARTNSTWP TTWFAPRLTG KGPFTDVYSV MANWGANHGV LTIGHVGADF
ITLAAMLRIP VCMHNVEEAK IYRPSAWAAH GMDIEGQDYR ACQNYGPLYK R