Gene SeHA_C3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3180 
Symbolxni 
ID6491101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3106296 
End bp3107051 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content55% 
IMG OID642743323 
Productexonuclease IX 
Protein accessionYP_002046942 
Protein GI194447676 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.529886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value0.683626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCTC ATCTGCTTAT CGTCGACGCG CTCAATTTGA TTCGCCGTAT TCACGCCGTT 
CAGGGAACGC CCTGTGTGGA AACCTGCCAA CACGCGCTCG ATCAATTGAT TATTCACAGC
CAGCCAACCC ATGCCGTAGC GGTATTTGAT GACGACGCGC GCAGCAGCGG CTGGCGTCAT
CAGCGTTTGC CGGACTACAA AGCAGGACGT CCGCCGATGC CTGACGATTT ACATAATGAA
ATGCCCGCCC TACGCGCCGC GTTTGAACAG CGCGGCGTAC GCTGTTGGGC ATCAGATGGT
AACGAAGCGG ACGATCTGGC GGCGACGCTG GCGCTAAAAG TTACCGAAGC CGGACACCAG
GCAACCATTG TGTCAACCGA TAAAGGCTAT TGCCAGTTGC TCTCTCCGGG ATTGCGCATT
CGCGACTACT TCCAGAAACG CTGGCTGGAC GCGCCGTTTA TTGAAAAAGA GTTTGGCGTA
CTTCCCCGGC AGTTGCCGGA TTACTGGGGT CTGGCAGGAA TCAGTAGTTC GAAAGTCCCC
GGCGTTGCCG GTATCGGCCC CAAAAGCGCG ACCCAGCTAT TGATTCAGTT TCAAAATCTG
GAGGGAATTT ACGCCCATCT GGACGAGGTG CCGGAAAAGT GGCGCAAAAA GCTTGAGACG
CATAAAGAAA TGGCATTTCT CTGCCGCGAT ATTGCACGTC TGCAAACCGA TTTACATATT
GACGGAAACT TACAGCAGCT ACGGCTGGCG CGGTAG
 
Protein sequence
MAAHLLIVDA LNLIRRIHAV QGTPCVETCQ HALDQLIIHS QPTHAVAVFD DDARSSGWRH 
QRLPDYKAGR PPMPDDLHNE MPALRAAFEQ RGVRCWASDG NEADDLAATL ALKVTEAGHQ
ATIVSTDKGY CQLLSPGLRI RDYFQKRWLD APFIEKEFGV LPRQLPDYWG LAGISSSKVP
GVAGIGPKSA TQLLIQFQNL EGIYAHLDEV PEKWRKKLET HKEMAFLCRD IARLQTDLHI
DGNLQQLRLA R