Gene SeHA_C3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3178 
Symbol 
ID6489449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3103410 
End bp3104699 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content53% 
IMG OID642743321 
Productserine transporter family protein 
Protein accessionYP_002046940 
Protein GI194451072 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value0.509174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCA CTCAGACCAG CACTATTGCT TCGATTGACT CTCGAAGCGC ATGGCGCAAA 
ACGGATACCA TGTGGATGCT GGGCCTTTAC GGCACGGCTA TCGGCGCGGG CGTTCTGTTC
CTGCCGATCA ACGCAGGCGT CGGCGGCATG ATTCCGCTCA TCATCATGGC GATTCTCGCT
TTCCCGATGA CCTTTTTCGC ACACCGTGGT TTAACCCGCT TCGTGCTGTC CGGTAAAAAT
CCGGGTGAAG ACATCACTGA AGTCGTTGAG GAACACTTCG GTATCGGCGC AGGTAAACTG
ATTACCCTGC TTTACTTCTT CGCGATTTAC CCCATCCTGC TGGTTTACAG CGTGGCGATT
ACTAATACCG TGGAAAGCTT CCTGACCCAC CAGTTAGCGA TTAATCCGCC GCCGCGGGCG
ATTCTTTCCC TGATCCTGAT TGTTGGCATG ATGACCATCG TGCGCTTCGG CGAGCAAATG
ATCGTTAAGG CGATGAGTAT CCTGGTATTC CCGTTCGTCG CTGCGCTGAT GCTGCTGGCC
TTGTACCTGA TCCCGCAGTG GAACGGCGCG GCGCTGGAAA CTCTGTCCTT TGATTCCGCC
GCGTCTACCG GTAACGGTCT GTGGATGACG CTGTGGCTGG CGATTCCGGT GATGGTTTTC
TCTTTCAACC ACTCCCCGAT CATCTCCTCC TTCGCGGTTG CGAAGCGTGA AGAGTACGGT
GAAGGCGCTG AGAAGAAATG TTCTAAAATT CTGGCCTTCG CCCACATCAT GATGGTGCTG
ACCGTGATGT TCTTCGTCTT CAGCTGCGTG CTGAGCCTGA CGCCGGCAGA TCTGGCAGCG
GCAAAAGAGC AGAACATCTC TATTCTGTCT TACCTGGCGA ACCATTTTAA CGCGCCGATC
ATCGCCTGGA TGGCGCCGAT CATTGCGATG ATTGCTATCA CCAAATCCTT CCTCGGCCAC
TACCTTGGCG CGCGTGAAGG CTTTAACGGG ATGGTGATTA AATCGCTGCG TGGTAAAGGT
AAATCCATCG AAATCAACAA ACTGAATAAA ATTACCGCGC TGTTCATGCT GGTCACCACC
TGGATTGTGG CGACGCTGAA CCCCAGCATC CTGGGCATGA TTGAAACCCT GGGCGGCCCG
ATCATCGCGA TGATTCTGTT CCTGATGCCG ATGTATGCCA TCCAGAAAGT ACCGGCAATG
CGTAAGTACA GCGGTCATAT CAGCAACGTA TTCGTTGTGA TTATGGGCCT GATTGCCATC
TCCGCTATTT TCTACTCACT GTTCAGCTAA
 
Protein sequence
METTQTSTIA SIDSRSAWRK TDTMWMLGLY GTAIGAGVLF LPINAGVGGM IPLIIMAILA 
FPMTFFAHRG LTRFVLSGKN PGEDITEVVE EHFGIGAGKL ITLLYFFAIY PILLVYSVAI
TNTVESFLTH QLAINPPPRA ILSLILIVGM MTIVRFGEQM IVKAMSILVF PFVAALMLLA
LYLIPQWNGA ALETLSFDSA ASTGNGLWMT LWLAIPVMVF SFNHSPIISS FAVAKREEYG
EGAEKKCSKI LAFAHIMMVL TVMFFVFSCV LSLTPADLAA AKEQNISILS YLANHFNAPI
IAWMAPIIAM IAITKSFLGH YLGAREGFNG MVIKSLRGKG KSIEINKLNK ITALFMLVTT
WIVATLNPSI LGMIETLGGP IIAMILFLMP MYAIQKVPAM RKYSGHISNV FVVIMGLIAI
SAIFYSLFS