| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3157 |
|---|
| Symbol | |
|---|
| ID | 6491605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 3081178 |
|---|
| End bp | 3081714 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642743301 |
|---|
| Product | fimbrial subunit |
|---|
| Protein accession | YP_002046920 |
|---|
| Protein GI | 194451439 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.731723 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 0.243757 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTA TTTTTCAAAC TGCCGGGCAT TTGATCGGAG GCGTAATGTT ATGGGCGGTT
TGCAATACGC TACCTGCCGC CACGCCTAAT GTGCACTACA GCGGTAAGCT GGTTGCCGGC
GCCTGTAACC TGGTAGTGGA TAATGACACG ATGGCGACGG TGGATTTTCA TACTATTGGC
AGTGACAATT TCGACGCCAG CGGGCAAACG ACTCCTGTTC CATTCACACT TAGCCTCCAG
GATTGCAAAA CAGCGCTAGC CAACGGCGTG CTGGTGACCT TTCAGGGCGT TGAAGACAGT
ACCCTGCCCG GACTGCTGGC GCTGGAGCCC TCGTCGGAAG CCAGTGGTTT TGCGATTGGC
GTGGAAACAG TCGCTCAGCA ACGGCTGGAT ATCAATGCTG TGCAGGGCAC CGCTTTTATG
CTGAAAGAAG GGATTACCAC CATCAACTTG CAGGCCAGGC TGCAAAAATA CGCTGGTGAA
GATGTTATGC CGGGGGAATT TAAGGGTAGC GCAACAGTGA GTTTTGAATA TCAGTAA
|
|---|
| Protein sequence | MNRIFQTAGH LIGGVMLWAV CNTLPAATPN VHYSGKLVAG ACNLVVDNDT MATVDFHTIG
SDNFDASGQT TPVPFTLSLQ DCKTALANGV LVTFQGVEDS TLPGLLALEP SSEASGFAIG
VETVAQQRLD INAVQGTAFM LKEGITTINL QARLQKYAGE DVMPGEFKGS ATVSFEYQ
|
|---|
| |