Gene SeHA_C3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3152 
Symbol 
ID6491153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3076018 
End bp3076605 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content49% 
IMG OID642743296 
Productputative fimbrial subunit 
Protein accessionYP_002046915 
Protein GI194450366 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.156636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCAT CTCATTTTTG TAAACTGGCA GTAACTGCAT CTTTAGTTAT GGGAATTGTC 
TCCGGCGCTC AAGCCGCGGG TAGTAACACA GCGAAGGTCA CTTTCCTTGG TAATATTGTT
GACTCCCCCT GCTCCGTCAC ATTGGATACG GAAGATCAAA CAGTCAATAT GGGTTCAAGT
ATCGGTAATG GCACGCTGAG TAATGGTAAA ACGACCATCA ACAATGCCCG TACCTTTCAT
ATCGATCTTG AGGGTTGTAC CTGGGCTACC GAGAAAAATA TGAATGTGGT ATTCACTACA
GGTAGTGGAA CCACAGCGGC TACAGGCGCC ACGGATAATC TCGCGCTGAT GAAGACTGAC
GGCACCGGCG CTATTAGCAA TGTAAGCCTG GCAATCGGCG ATGCTGGCAA AAACAATATC
AAACTGGGCG ATACCTATAC ACAGGCCATT GCGGACCTGG ACGGAGATAC CATTCTTGAT
GAGAAGCAAA GCCTGAATTT CACCGCCTGG CTGGTTGGCG CAGCAACCGG CACCGTAGGC
ACAGGTGAAT TCAGCAGTGC CGCCAACGTC ACTATCTCTT ACCTGTAA
 
Protein sequence
MKSSHFCKLA VTASLVMGIV SGAQAAGSNT AKVTFLGNIV DSPCSVTLDT EDQTVNMGSS 
IGNGTLSNGK TTINNARTFH IDLEGCTWAT EKNMNVVFTT GSGTTAATGA TDNLALMKTD
GTGAISNVSL AIGDAGKNNI KLGDTYTQAI ADLDGDTILD EKQSLNFTAW LVGAATGTVG
TGEFSSAANV TISYL