Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3143 |
Symbol | cysJ |
ID | 6488368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3065567 |
End bp | 3067366 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642743287 |
Product | sulfite reductase subunit alpha |
Protein accession | YP_002046906 |
Protein GI | 194449739 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.49504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.285573 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACAC CGGCTCCACT GACTGGGTTG CTTCCGCTTA ATCCGGAGCA ACTGGCGCGC CTTCAGGCCG CGACAACCGA CCTTACTCCC GAACAGCTTG CCTGGGTCTC CGGCTATTTT TGGGGCGTAC TGAACCCGCG CTCAGGCGCT GTTGCCGTCA CGCCTGCTCC TGAGGGGAAG ATGCCGGGGG TTACGCTTAT CTCCGCTTCG CAAACCGGCA ATGCGCGTCG TGTGGCGGAA GCGCTGCGTG ATGATCTGCT GGCGGCCAAC CTTAATGTGA CACTGGTGAA CGCCGGCGAC TACAAATTCA AACAGATTGC CAGTGAAAAA CTGCTGGTGA TAGTGACGTC CACTCAGGGA GAAGGCGAGC CGCCGGAAGA GGCCGTCGCG CTGCATAAGT TCCTGTTCTC GAAAAAAGCG CCGAAACTGG AAAACACCGC TTTTGCCGTG TTTAGCCTCG GCGACACCTC TTATGAATTT TTCTGCCAGT CCGGAAAAGA TTTCGACAGC AAGCTGGCGG AGCTGGGCGG TGAACGTCTG CTCGACCGTG TCGATGCTGA CGTTGAATAT CAGGCAGCTG CCAGCGAATG GCGCGCCCGC GTGGTTGATG TTCTGAAGTC CCGCGCACCT GTCGCGGCAC CTTCGCAATC CGTTGCTACT GGCGCGGTAA ACGATATCCA CACCAGCCCC TATACCAAAG ACGCGCCGCT GACCGCGACC CTCTCCGTGA ATCAGAAAAT CACCGGTCGC AACTCGGAAA AAGACGTTCG TCATATTGAA ATTGACCTCG GCGACTCCGG CCTGCGCTAT CAGCCGGGCG ATGCGCTGGG CGTCTGGTAT CAGAACGATC CGGCTCTGGT GAAGGAGCTG GTTGAGTTGC TGTGGCTGAA AGGCGATGAG CCGGTGACGG TTGACGGTAA AACCCTGCCG CTCGCCGAAG CGCTGGAGTG GCACTTCGAG CTGACGGTGA ATACCGCCAA CATTGTTGAG AACTACGCGA CCCTGACGCG CAGTGAGTCG CTGTTGCCAT TAGTGGGTGA CAAAGCGCAG CTCCAGCACT ACGCCGCCAC TACGCCCATT GTTGATATGG TGCGTTTCTC TCCGGCGCAG CTGGATGCTC AGGCGCTAAT CGACCTGCTG CGCCCGCTGA CGCCGCGTCT GTACTCCATC GCCTCCGCGC AGGCGGAAGT GGAAAGCGAA GTGCATATCA CCGTTGGCGT GGTTCGTTAT GACATTGAAG GCCGCGCCCG CGCCGGTGGC GCTTCCAGCT TCCTCGCCGA CCGCGTGGAA GAAGAGGGCG AAGTTCGCGT CTTTATTGAG CATAACGATA ACTTCCGCCT GCCAGCTAAC CCGCAGACGC CGGTCATTAT GATTGGCCCC GGCACCGGCA TCGCGCCGTT CCGCGCCTTT ATGCAACAGC GCGCGGTGGA AGGGGCGGAA GGTAAGAACT GGCTGTTCTT CGGCAACCCG CACTTTACCG AAGATTTCCT CTATCAGGTG GAGTGGCAGC GCTACGTGAA AGAAGGCGTG CTGAGCCGGA TCGATCTGGC CTGGTCTCGC GATCAAAAAG AAAAAATTTA CGTACAAGAC AAGCTGCGTG AACAGGGCGC CGAGCTGTGG CGCTGGATCA ATGATGGCGC GCATATTTAT GTCTGCGGCG ACGCCAGGCG CATGGCCGCA GATGTCGAAA AAGCATTGCT GGAAGTGATC GCTGAATTCG GCGGTATGGA CCTCGAATCG GCAGATGAAT ATTTAAGTGA GCTGCGCGTA GAGCGCCGTT ATCAGCGAGA TGTCTACTAA
|
Protein sequence | MTTPAPLTGL LPLNPEQLAR LQAATTDLTP EQLAWVSGYF WGVLNPRSGA VAVTPAPEGK MPGVTLISAS QTGNARRVAE ALRDDLLAAN LNVTLVNAGD YKFKQIASEK LLVIVTSTQG EGEPPEEAVA LHKFLFSKKA PKLENTAFAV FSLGDTSYEF FCQSGKDFDS KLAELGGERL LDRVDADVEY QAAASEWRAR VVDVLKSRAP VAAPSQSVAT GAVNDIHTSP YTKDAPLTAT LSVNQKITGR NSEKDVRHIE IDLGDSGLRY QPGDALGVWY QNDPALVKEL VELLWLKGDE PVTVDGKTLP LAEALEWHFE LTVNTANIVE NYATLTRSES LLPLVGDKAQ LQHYAATTPI VDMVRFSPAQ LDAQALIDLL RPLTPRLYSI ASAQAEVESE VHITVGVVRY DIEGRARAGG ASSFLADRVE EEGEVRVFIE HNDNFRLPAN PQTPVIMIGP GTGIAPFRAF MQQRAVEGAE GKNWLFFGNP HFTEDFLYQV EWQRYVKEGV LSRIDLAWSR DQKEKIYVQD KLREQGAELW RWINDGAHIY VCGDARRMAA DVEKALLEVI AEFGGMDLES ADEYLSELRV ERRYQRDVY
|
| |