| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3137 |
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| Symbol | cse1 |
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| ID | 6489646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | - |
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| Start bp | 3057204 |
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| End bp | 3058760 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642743282 |
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| Product | Cse1 family CRISPR-associated protein |
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| Protein accession | YP_002046901 |
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| Protein GI | 194447974 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.199062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 0.768115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATT TTTCACTTTT AACAACGCCC TGGCTCCCCG TCCGTTTCAA AGACGGTTCC
ACGGGCAAGC TGGCCCCCGT CGATCTGGCG GATGAAAACG TGGTGGACAT CGCCGCAACG
CGAGCAGATT TACAGGGAGC GGCCTGGCAG TTTCTGTTGG GATTGCTGCA ATGCAGTATC
GCGCCGAAAA GATACAAAAA TTGGGAGGAT ATCTGGTTTG ATGGATTGCA TGCCGATGTG
CTCCATAAGG CATTAGCACC GTTAGAACAC GCTTTTCAGT TTGGCGCGGA ATCCCCCTCG
TTTATGCAGG ATTTTGAACC GTTAAGCGGC GAAAAAGTCT CTATTGCCTC ATTGTTGCCG
GAAATACCTG GCGCGCAAAC CACGAAGTTC AATAAAGATC ATTTTGTCAA ACGCGGCGTA
ACGGAACGTT TTTGTCCGCA CTGCGCGGCG CTGGCGCTGT TCTCGTTGCA GCTTAACGCG
CCTGCGGGCG GCAAAGGCTA TCGTACCGGG CTGCGCGGCG GCGGGCCACT GACCACGCTG
GTTGAATTGC AGGAATATCA GGGCGAGCGG CAAACGCCGC TCTGGCGCAA GCTGTGGCTC
AACGTGATGC CGCAGGATAC TGCGGATCTG CCTTTACCAG ACCAGTGTGA TGCGACCGTT
TTCCCGTGGC TTGCCGCGAC GCGGACCAGC GAGCAGGCGA ATGCCGTTAC CACGCCGGAG
CAGGTCAATA AACTCCAGGC GTACTGGGGG ATGCCGCGTC GTATCCGCCT GGATTTTGCC
ACCTTACAGT CAGGTTGCTG CGATATTTGC GGCGCTGAAA GCGATGAGCT TCTTGGCTTT
ATGACCGTTA AGAACTACGG CGTTAACTAC GATGGCTGGC GTCATCCGCT GACGCCCTAT
CGCGCCCCGG TAAAAGATCA AAACGCCTTC TTTTCCGTTA AACCGCAGCC CGGCGGCCTT
ATCTGGCGCG ACTGGCTGGG ATTAAGTCAG AACAACCAGA CGGAAGCGAA TTACGAATCT
CCCGCGCAGG TAGTCAAGGT GTTTAACGCC CGCTCGCTGA CTGACGTTAA AGCGGGGATC
TGGGGCTTTG GCGCGGATTT CGACAATATG AAAATCCGCT GCTGGTATGA GCATCACTTC
CCGTTGCTGA TGACGGAAGG TCTGATCCCT GATTTACGTA AGGCCGTGCA AACTGCGGCC
CGCCTGTTGA GCCTGCTTCG CAGTGCGCTA AAAGAAGCGT GGTTCGCCAA TGCGAAGGAT
GCCCGCGGTG ATTTCAGTTT TATCGACATT GATTTCTGGA ACCTGACGCA GGGACGTTTT
CTCAACCTGA TTCACGATCT GGAAAACGGC CACAAGCCGG ACGAAAGGTT GAATAAATGG
CAAAGAGAAC TTTGGCTGTT TACCCGTCAT TACTTCGATG ATCACGTCTT TACCAACCCC
TACGAGAGCA GCGATCTGGA ACGCATCATG ACCGCGCGCA AGAAATATTT TACGACATCG
GCGGAAAAAC AAAGCGCAAA AGCCGCCAAA GCAAAGAAAC AGGAGGCTGC TGAATGA
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| Protein sequence | MDNFSLLTTP WLPVRFKDGS TGKLAPVDLA DENVVDIAAT RADLQGAAWQ FLLGLLQCSI
APKRYKNWED IWFDGLHADV LHKALAPLEH AFQFGAESPS FMQDFEPLSG EKVSIASLLP
EIPGAQTTKF NKDHFVKRGV TERFCPHCAA LALFSLQLNA PAGGKGYRTG LRGGGPLTTL
VELQEYQGER QTPLWRKLWL NVMPQDTADL PLPDQCDATV FPWLAATRTS EQANAVTTPE
QVNKLQAYWG MPRRIRLDFA TLQSGCCDIC GAESDELLGF MTVKNYGVNY DGWRHPLTPY
RAPVKDQNAF FSVKPQPGGL IWRDWLGLSQ NNQTEANYES PAQVVKVFNA RSLTDVKAGI
WGFGADFDNM KIRCWYEHHF PLLMTEGLIP DLRKAVQTAA RLLSLLRSAL KEAWFANAKD
ARGDFSFIDI DFWNLTQGRF LNLIHDLENG HKPDERLNKW QRELWLFTRH YFDDHVFTNP
YESSDLERIM TARKKYFTTS AEKQSAKAAK AKKQEAAE
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