Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3135 |
Symbol | cse4 |
ID | 6491245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3055575 |
End bp | 3056633 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642743280 |
Product | Cse4 family CRISPR-associated protein |
Protein accession | YP_002046899 |
Protein GI | 194451697 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACGT TTATTCAGCT CCATTTACTG ACCGCTTACC CCGCCGCTAA CCTGAACCGT GATGATACCG GTGCGCCAAA AACCGTGGTG CTTGGCGGAG CAACACGTCT GCGTATCTCC TCTCAGAGCC TGAAACGCGC CTGGCGTACA TCTGAGTTAT TTGAACAGGC ATTAGCTGGC CATATTGGTA TTCGTACTGG TCGCATTGCT CGTGAGGCGG CGCAAATCCT CGTTGATAGC GGCATTGACG CCAAAAAAGC GGTTGAGTAC GTCAAGAACA TCGCCAACTG CTTTGGCAAG GTAAAAGAGG ATAAGAAACC CAAAGATGAG TTGACGAATG CTGAAACCGA GCAACTGGTG CATATCAGCC CTGCTGAGTT TGAGGCCGTG AAAGCGCTGG CGCGCCGTCT GGCAGAAGAA AAACGTCCGG CAACAGAAGA GGAAGCAGAA CTGTTACGTC ACGATCGCAT GGCCGTCGAT ATTGCCATGT TTGGCCGGAT GTTAGCGAAG AAAACTGATT TTAACGTGGA AGCCGCCTGC CAGGTCGCCC ACGCCTTCGG CGTCAGCGAA ACGATCATCG AAGACGATTT CTTTACCGCT GTGGATGACC TACGCCAGGC ATCGGCAGAA GATGCAGGCG CAGGCCATCT CGGCGAAACC GGCTTTGGCT CCGCGCTGTT TTACACCTAT ATCTGCATCG ACAAAGATCT GCTGGTGAAA AACCTGAACG ACAATGAAGA ACTGGCAAAC AAAACGCTGC GCGCCTTTAC TGAAGCGGCG CTGAAAGTGT CGCCGACCGG CAAACAGAAC AGCTTTGCCA GCCGTGCCTA TGCCTCGTGG GCGCTGGCCG AAAAAGGCAC CGACCAACCA CGTTCACTGG CGGCCGCGTT TTATGAACCG ATCAACGGTA CAGACCAATT GAACGTTGCG GTTAAGCGTA TTACATCGCT GCATAAGAAT ATGAATAAGG TTTATGGCCA GCGGACTGAT ACCGCCAGTT TCGACGTGAT GAATCAGCAG GGAAGCATGA AAGACGTGCT TGATTTCATC TGCGCGTAA
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Protein sequence | MTTFIQLHLL TAYPAANLNR DDTGAPKTVV LGGATRLRIS SQSLKRAWRT SELFEQALAG HIGIRTGRIA REAAQILVDS GIDAKKAVEY VKNIANCFGK VKEDKKPKDE LTNAETEQLV HISPAEFEAV KALARRLAEE KRPATEEEAE LLRHDRMAVD IAMFGRMLAK KTDFNVEAAC QVAHAFGVSE TIIEDDFFTA VDDLRQASAE DAGAGHLGET GFGSALFYTY ICIDKDLLVK NLNDNEELAN KTLRAFTEAA LKVSPTGKQN SFASRAYASW ALAEKGTDQP RSLAAAFYEP INGTDQLNVA VKRITSLHKN MNKVYGQRTD TASFDVMNQQ GSMKDVLDFI CA
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