Gene SeHA_C3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3133 
Symbolcse3 
ID6489324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3054186 
End bp3054836 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content57% 
IMG OID642743278 
ProductCse3 family CRISPR-associated protein 
Protein accessionYP_002046897 
Protein GI194448933 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATCTCT CAAGAATAAC GCTGCACACC AGCGAGCTTT CGCCGGCACA GCTCTTGCAT 
CTGGTGGAGC GCGGCGAGTA CGTGATGCAC CAGTGGTTAT GGGATCTCTT TCCCGGCAGC 
AAGGAACGGC AGTTTCTTTA TCGCCGCGAA GAGTTACAGG GCGCGTTTCG CTTTTTTGTT 
CTCTCACAGG AACAGCCTGC CGCCAGCGCG ATTTTTGACG TGCAGACTCG CCCATTTGCG 
CCAACGCTGA GCGCGGGGCA GACGCTGCGG TTTAACCTGC GCGCCAATCC GACGGTTTGC 
AAAAACGGCA AGCGTCACGA TTTGCTGATG GAGGCGAAAC GCCAGCGTAA AACGCAGGGT 
GATAGCCAGG ATATTTGGTC TTATCAGCAG CAGGCGGCGC TGACGTGGTT GGCGCGCCAG 
GGGGAGCAAA ATGGCTTTAC TCTGCGCGAG GCGAGCGTTG ATGCTTATCG GCAGCAGCAG 
ATACGTCGCG GGAAAGATCG GCAGATGATT CAGTTTAGCA GCGTGGACTA TACCGGCGTG 
CTGGTGATTA ACGAACCCGC GCTTTTCCTG CAACGTCTGG CGCAGGGGTT CGGTAAAAGC 
CGGGCGTTTG GCTGCGGAAT GATGATGATC AAACCTGGAG ACGACGCGTG A
 
Protein sequence
MYLSRITLHT SELSPAQLLH LVERGEYVMH QWLWDLFPGS KERQFLYRRE ELQGAFRFFV 
LSQEQPAASA IFDVQTRPFA PTLSAGQTLR FNLRANPTVC KNGKRHDLLM EAKRQRKTQG 
DSQDIWSYQQ QAALTWLARQ GEQNGFTLRE ASVDAYRQQQ IRRGKDRQMI QFSSVDYTGV 
LVINEPALFL QRLAQGFGKS RAFGCGMMMI KPGDDA