Gene SeHA_C3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3116 
Symbolpcm 
ID6489240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3042464 
End bp3043090 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content57% 
IMG OID642743265 
Productprotein-L-isoaspartate O-methyltransferase 
Protein accessionYP_002046884 
Protein GI194450772 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.184656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGTG GACGTGTACA GGCTCTTCTT GAACAATTGC GCGCGCAGGG CATCAGAGAT 
GAGCAGGTGC TTAATGCGCT TGCCGCAGTG CCGCGCGAGA AATTTATTGA TGAAGCGTTT
GAACATAAGG CCTGGGAAAA TATCGCTTTG CCGATAGGCC AGGGTCAGAC GATTTCGCAG
CCCTATATGG TGGCGCGAAT GACGGAACTG CTCGAACTGA CGCCGCAATC CAGGGTGCTG
GAAATTGGCA CCGGTTCCGG CTATCAGACG GCGATTCTGG CGCATCTGGT ACATCACGTT
TGCTCCGTTG AGCGGATTAA GGGGCTGCAA TGGCAGGCGC GTCGCCGCCT GAAGCAGCTC
GATTTACATA ATGTTTCTAC CCGTCATGGC GATGGCTGGC AAGGCTGGCA GGCGCGTGCG
CCGTTTGACG CTATCATTGT GACGGCCGCG CCACCGGAAA TTCCTACCGC GCTCATGGCA
CAGTTGGATG AAGGCGGCAT TCTTGTTCTG CCCGTGGGCG ATGAGCAGCA GTTTTTGAAA
CGCGTGCGTC GCCGGGGCGG CGAATTTATT ATCGATACCG TGGAGGCCGT TCGCTTCGTC
CCGTTAGTCA AGGGAGAGCT GGCCTAG
 
Protein sequence
MVSGRVQALL EQLRAQGIRD EQVLNALAAV PREKFIDEAF EHKAWENIAL PIGQGQTISQ 
PYMVARMTEL LELTPQSRVL EIGTGSGYQT AILAHLVHHV CSVERIKGLQ WQARRRLKQL
DLHNVSTRHG DGWQGWQARA PFDAIIVTAA PPEIPTALMA QLDEGGILVL PVGDEQQFLK
RVRRRGGEFI IDTVEAVRFV PLVKGELA