| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3111 |
|---|
| Symbol | kpdC |
|---|
| ID | 6489259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 3038380 |
|---|
| End bp | 3039807 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642743261 |
|---|
| Product | 4-hydroxybenzoate decarboxylase subunit C |
|---|
| Protein accession | YP_002046880 |
|---|
| Protein GI | 194451598 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTG ATGATTTGCG CAGTTTTTTA CATGCGCTGG ATCAGCAGGG ACAACTGCTG
AAAATCAGCG AGGAAGTGAA TGCGGAGCCG GATCTCGCCG CCGCTGCCAA CGCAACGGGA
CGCATCGGCG ATGGCGCGCC CGCGCTGTGG TTTGACAATA TTCGTGGTTT TACCGACGCC
CGCGTGGCGA TGAATACCAT CGGTTCCTGG CAGAACCATG CCATCTCACT GGGTTTGCCG
CCTAACACGC CGGTTAAAAA ACAGATCGAT GAATTTATTC GCCGCTGGGA CAATTTTCCG
GTAGCGCCGG AACGACGGGC GAATCCGGGC TGGGCGGAAA ATACCGTCGA CGGCGACGCA
ATCAACCTGT TTGATATCCT GCCGCTGTTT CGTCTGAACG ACGGCGACGG CGGATTCTAT
CTGGATAAAG CCTGTGTGGT ATCACGCGAT CCGCTCGATC CCGATAACTT CGGCAAGCAG
AATGTCGGCA TCTACCGCAT GGAAGTTAAA GGCAAGCGTA AGCTGGGTCT GCAACCAGTG
CCGATGCATG ATATCGCATT GCATCTGCAC AAAGCTGAAG AGCGCGGGGA AGATCTGCCG
ATTGCGATCA CGTTGGGTAA CGATCCGATC ATTACCCTGA TGGGCGCAAC GCCGCTGAAA
TACGATCAGT CAGAGTATGA AATGGCAGGC GCGCTGCGTG AAAGCCCCTA TCCTATCGCC
ACCGCGCCGT TGACCGGTTT TGATGTGCCG TGGGGATCTG AAGTCATTCT TGAAGGGGTC
ATCGAAAGCC GTAAACGTGA AATTGAAGGA CCGTTCGGCG AATTTACCGG CCACTATTCC
GGCGGTCGCA ACATGACCGT GGTGCGTATC GATAAGGTCT CTTATCGCAG CAAACCCATT
TTTGAATCGC TCTATTTGGG GATGCCGTGG ACGGAAATCG ACTACCTGAT GGGGCCGGCG
ACCTGCGTGC CACTGTATCA ACAGCTGAAA GCCGAATTTC CGGAAGTGCA GGCGGTAAAC
GCCATGTACA CCCACGGCCT GCTGGCCATC ATCTCAACCA AAAAACGCTA CGGCGGCTTT
GCCCGCGCGG TGGGCCTGCG AGCGATGACG ACGCCGCACG GTCTGGGATA TGTGAAGATG
GTGATCATGG TCGATGAAGA TGTCGATCCA TTCAATCTGC CACAGGTGAT GTGGGCGTTG
TCGTCGAAAG TGAATCCGGC AGGCGATCTG GTACAGCTAC CGAATATGTC CGTCCTGGAA
CTGGACCCGG GCTCAAGCCC GGCGGGGATT ACCGACAAGC TGATCATTGA CGCCACCACG
CCGGTTGCGC CAGATAACCG TGGTCACTAT AGCCAGCCGG TTGTTGATTT ACCGGAAACT
AAAGCCTGGG CTGAAAAGCT GACCGCCATG CTGGTCAACC GTAAATAA
|
|---|
| Protein sequence | MAFDDLRSFL HALDQQGQLL KISEEVNAEP DLAAAANATG RIGDGAPALW FDNIRGFTDA
RVAMNTIGSW QNHAISLGLP PNTPVKKQID EFIRRWDNFP VAPERRANPG WAENTVDGDA
INLFDILPLF RLNDGDGGFY LDKACVVSRD PLDPDNFGKQ NVGIYRMEVK GKRKLGLQPV
PMHDIALHLH KAEERGEDLP IAITLGNDPI ITLMGATPLK YDQSEYEMAG ALRESPYPIA
TAPLTGFDVP WGSEVILEGV IESRKREIEG PFGEFTGHYS GGRNMTVVRI DKVSYRSKPI
FESLYLGMPW TEIDYLMGPA TCVPLYQQLK AEFPEVQAVN AMYTHGLLAI ISTKKRYGGF
ARAVGLRAMT TPHGLGYVKM VIMVDEDVDP FNLPQVMWAL SSKVNPAGDL VQLPNMSVLE
LDPGSSPAGI TDKLIIDATT PVAPDNRGHY SQPVVDLPET KAWAEKLTAM LVNRK
|
|---|
| |