Gene SeHA_C3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3108 
Symbol 
ID6489792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3036429 
End bp3037193 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content56% 
IMG OID642743258 
ProductDeoR family transcriptional regulator 
Protein accessionYP_002046877 
Protein GI194450468 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATACCTA CTGAGCGTCG ACAAATCATT CTTGATATGG TGGCGGAGAA AGGCATCGTC 
AGTATCTCTG AACTGACCGA GCGCATGCAT GTATCCCACA TGACTATCCG CCGTGATTTA
CAAAAACTGG AGCAGCAAGG CGCGGTAATC CAGGTCTCTG GCGGCGTGCA ATCATCGACT
CGCGTGGCGC ACGAACCCTC GCATCAGATC AAAACCGAAC TGGCGACGCC GCAGAAAGCG
GCGATTGGCA AACTGGCCGC CAGCCTGGTA CAGCCAGAAA GCTGTATCTA CCTTGATGCA
GGTACTACCA CGCTGGCGAT CGCCAGGCAG CTGGTTACGA TGAATAAACT TACGGTGGTG
ACGAATGATT TCGTTATCGC CGATTACCTG ATGGACAATA GCGATTGCAC AATTATTCAC
ACTGGCGGGG CGGTATGCCG GGAAAACCGG TCGTGCGTCG GTGAAGCCGC GGCGATGCTT
TTGCGCGGGC TGATGATTGA CCAGGCCTTT ATTTCCGCCT CTTCCTGGAG CGTGCGCGGT
ATTTCAACGC CGGCAGAAGA TAAAGTCACG GTGAAACGGG CCGTCGCCAG CGCCAGCCGC
CAAAAAATTC TGGTGTGCGA CGCGACCAAA TACGGCCAGG TCGCGACGTG GCTGGCGTTA
CCGCTGGCGG AATTCAACCA AATCGTCACC GATGACGGCC TGCCGGAAAG CGCAATTCGG
GCGCTGGCCA AAGTGGATAT CTCACTGCTG ATGGCCAAAC AATAG
 
Protein sequence
MIPTERRQII LDMVAEKGIV SISELTERMH VSHMTIRRDL QKLEQQGAVI QVSGGVQSST 
RVAHEPSHQI KTELATPQKA AIGKLAASLV QPESCIYLDA GTTTLAIARQ LVTMNKLTVV
TNDFVIADYL MDNSDCTIIH TGGAVCRENR SCVGEAAAML LRGLMIDQAF ISASSWSVRG
ISTPAEDKVT VKRAVASASR QKILVCDATK YGQVATWLAL PLAEFNQIVT DDGLPESAIR
ALAKVDISLL MAKQ