Gene SeHA_C3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3101 
Symbol 
ID6487885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp3029201 
End bp3030112 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content55% 
IMG OID642743251 
ProductLysR family transcriptional regulator 
Protein accessionYP_002046870 
Protein GI194450263 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAATT TGCAGCGTAT GTCGCTGTTT ATCGCCGTGG TAGATAGCGG CAGCTTCACG 
GCCGCCGCCG CCGCATCGGG CCAAACAAAA GCGGTAGTGA GTTTTAATAT TCGGCAGCTT 
GAAAAAGAGC TTGGCGTAAC GTTACTGCTA CGTTCCACCC GACGATTGAC GCTCACAGAC 
GCCGGCGTCC TCTTTTACCA AAAAGGCGTG AATTTACTCA ACGCAGCGAA AAATTTGCAG 
GATGAAGTGC GTGCCAGCCA TAGTGGGCTG GGCGGCGAGT TACGTATTAC CACTACGCCC 
GAGTTTGGCG AACAGGTGAT CATTCCGTTA CTGGCGCAGT TTAGTCAGCG CCATCCCGAT 
CTCCGTATTC GGCATATGTC CTCATCACAT CATGCCGATT TAATTGCCGA GCGCTTTGAT 
GTGGCGATTC GGCTTGGCTC GCTGGCCGAC TCCCGCTATC GCGCCGCGCT GATATCCCGC 
TTTACCATTC TGCCGGTCGC CGCGCCGCAG TGGCTCGCCC GCAACCCCGT GTCGTCGCTG 
GAGTCGTTGG CTCAGGCGGA ATGGATTATT CATGAGCGAT TACCTACGCC GCTACGGTGG 
ACAGTAACGA GTAATCATGG CCAACACTCA CGCCTGGAGA TAAGCAAAGC CGGCAAAATT 
TCTGTCGACA GCGCGCGCTC GCTGATGGCC TTCGCTCTCG CGGGAAGCGG CGTCGCATTA 
CTGCCGCAAT GGTTAGTCAA CACCGCACTG GAGGATGGAA CGTTAATTCA CGTGTTACCC 
GACTATCATT TTCCCCGTCA GGGCATTTAT GCCGTTTACC CGGACGCCCG CCATGTATCG 
ACAAAAGTAC GCGCATTTAT TGATTTTTTA CGTTCGCAAT GGGATTGCGG GGAGCACGCC 
CCATCATCGT AG
 
Protein sequence
MLNLQRMSLF IAVVDSGSFT AAAAASGQTK AVVSFNIRQL EKELGVTLLL RSTRRLTLTD 
AGVLFYQKGV NLLNAAKNLQ DEVRASHSGL GGELRITTTP EFGEQVIIPL LAQFSQRHPD 
LRIRHMSSSH HADLIAERFD VAIRLGSLAD SRYRAALISR FTILPVAAPQ WLARNPVSSL 
ESLAQAEWII HERLPTPLRW TVTSNHGQHS RLEISKAGKI SVDSARSLMA FALAGSGVAL 
LPQWLVNTAL EDGTLIHVLP DYHFPRQGIY AVYPDARHVS TKVRAFIDFL RSQWDCGEHA 
PSS