Gene SeHA_C3084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3084 
Symbol 
ID6490281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3011191 
End bp3012486 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content54% 
IMG OID642743235 
ProductATP synthase SpaL 
Protein accessionYP_002046854 
Protein GI194448712 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value0.755364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC CTCGTTTACT GCAATATCTG GCCTACCCAC AAAAAATAAC CGGCCCAATT 
ATTGAGGCGG AATTGCGCGA TGTAGCCATT GGCGAACTGT GTGAAATACG CCGTGGCTGG
CACCAAAAAC AGGTTGTTGC ACGTGCGCAG GTGGTTGGCT TACAGCGGGA ACGCACTGTG
CTGAGCCTTA TCGGCAACGC CCAGGGGCTG AGCCGCGATG TCGTGCTTTA TCCCACTGGA
CGTGCGTTAT CGGCGTGGGT GGGATACTCG GTATTAGGCG CGGTGTTGGA TCCGACGGGG
AAAATCGTTG AGCGTTTTAC CCCTGAAGTG GCGCCGATTA GCGAAGAACG CGTTATTGAT
GTCGCACCGC CGTCTTACGC TTCGCGCGTT GGCGTCCGTG AACCGCTGAT TACCGGTGTG
CGCGCGATTG ACGGGTTATT GACCTGTGGC GTAGGCCAGC GAATGGGCAT TTTTGCCTCC
GCAGGATGCG GTAAGACCAT GCTGATGCAT ATGCTGATCG AGCAAACGGA GGCGGATGTC
TTTGTTATCG GTCTTATCGG TGAACGAGGC CGTGAGGTCA CTGAATTCGT GGATATGTTG
CGCGCTTCGC ATAAGAAAGA AAAATGCGTG CTGGTTTTTG CCACTTCCGA TTTCCCCTCG
GTCGATCGCT GCAATGCGGC GCAACTGGCG ACAACCGTAG CGGAATATTT TCGCGACCAG
GGAAAACGGG TCGTGCTTTT TATCGATTCC ATGACCCGTT ATGCGCGTGC TTTGCGAGAC
GTGGCACTGG CGTCGGGAGA GCGTCCGGCT CGTCGAGGTT ATCCCGCCTC CGTATTCGAT
AATTTGCCCC GCTTGCTGGA ACGCCCAGGG GCGACCAGCG AGGGAAGCAT TACTGCCTTT
TATACGGTAC TGCTGGAAAG CGAGGAAGAG GCGGACCCGA TGGCGGATGA AATTCGCTCT
ATCCTTGACG GTCACCTGTA TCTGAGCAGA AAGCTGGCCG GGCAGGGACA TTACCCGGCA
ATCGATGTAC TGAAAAGCGT AAGCCGCGTT TTTGGACAAG TCACGACGCC GACACATGCT
GAACAGGCAT CTGCCGTGCG TAAATTAATG ACGCGTTTGG AAGAGCTCCA GCTTTTCATT
GACTTGGGAG AATATCGTCC TGGCGAAAAT ATCGATAACG ATCGGGCGAT GCAGATGCGG
GATAGCCTGA AAGCCTGGTT ATGCCAGCCG GTAGCGCAGT ATTCATCCTT TGATGACACG
TTGAGCGGTA TGAATGCATT CGCTGACCAG AATTAA
 
Protein sequence
MKTPRLLQYL AYPQKITGPI IEAELRDVAI GELCEIRRGW HQKQVVARAQ VVGLQRERTV 
LSLIGNAQGL SRDVVLYPTG RALSAWVGYS VLGAVLDPTG KIVERFTPEV APISEERVID
VAPPSYASRV GVREPLITGV RAIDGLLTCG VGQRMGIFAS AGCGKTMLMH MLIEQTEADV
FVIGLIGERG REVTEFVDML RASHKKEKCV LVFATSDFPS VDRCNAAQLA TTVAEYFRDQ
GKRVVLFIDS MTRYARALRD VALASGERPA RRGYPASVFD NLPRLLERPG ATSEGSITAF
YTVLLESEEE ADPMADEIRS ILDGHLYLSR KLAGQGHYPA IDVLKSVSRV FGQVTTPTHA
EQASAVRKLM TRLEELQLFI DLGEYRPGEN IDNDRAMQMR DSLKAWLCQP VAQYSSFDDT
LSGMNAFADQ N