Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3064 |
Symbol | |
ID | 6489818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 2992350 |
End bp | 2993279 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642743219 |
Product | transcriptional regulator HilD |
Protein accession | YP_002046838 |
Protein GI | 194448716 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0281413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.145015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATG TAACCTTTGT AAGTAATAGT CATCAGCGTC CTGCCGCAGA TAACTTACAG AAATTAAAAT CACTTTTGAC AAATACCCGG CAGCAAATTA AAAGTCAGAC TCAGCAGGTT ACCATCAAAA ATCTTTATGT AAGCAGTTTC ACTTTAGTTT GCTTTCGGAG CGGTAAACTG ACGATTAGCA ATAATCACGA TACGATTTAC TGTGACGAAC CTGGGATGTT GGTGCTCAAA AAAGAGCAGG TAGTTAACGT GACGCTTGAA GAGGTCAATG GCCACATGGA TTTCGATATA CTCGAGATAC CGACGCAACG ACTTGGCGCT CTCTATGCAC TTATCCCAAA CGAGCAGCAA ACCAAAATGG CGGTACCCAC AGAGAAAGCG CAGAAAATCA TCTATACGCC TGACTTTCCT GCCAGAAGAG AGGTATTTGA ACATCTGAAA ACGGCGTTCT CCTGTACGAA GGATACAAGC AAAGGTTGCA GTAACTGTAA CAACAAGAGT TGTATTGAAA ATGAAGAGTT AATTCCTTAT TTTCTGCTGT TCCTGCTTAC TGCTTTTCTC CGACTCCCGG AGAGTTATGA GATCATCCTT AGCTCGGCTC AGATAACGTT AAAGGAGCGC GTTTACAACA TTATATCTTC GTCACCCAGT AGACAGTGGA AGCTTACGGA TGTTGCCGAT CATATATTTA TGAGTACGTC AACGCTCAAA CGGAAACTTG CAGAAGAAGG TACCAGCTTT AGCGACATCT ACTTATCGGC AAGAATGAAT CAGGCAGCAA AACTTTTACG CATAGGCAAC CATAATGTTA ATGCTGTAGC ATTAAAATGT GGTTATGATA GCACGTCCTA CTTCATTCAA TGTTTCAAAA AATATTTTAA AACTACGCCA TCGACATTCA TAAAAATGGC GAACCATTAA
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Protein sequence | MENVTFVSNS HQRPAADNLQ KLKSLLTNTR QQIKSQTQQV TIKNLYVSSF TLVCFRSGKL TISNNHDTIY CDEPGMLVLK KEQVVNVTLE EVNGHMDFDI LEIPTQRLGA LYALIPNEQQ TKMAVPTEKA QKIIYTPDFP ARREVFEHLK TAFSCTKDTS KGCSNCNNKS CIENEELIPY FLLFLLTAFL RLPESYEIIL SSAQITLKER VYNIISSSPS RQWKLTDVAD HIFMSTSTLK RKLAEEGTSF SDIYLSARMN QAAKLLRIGN HNVNAVALKC GYDSTSYFIQ CFKKYFKTTP STFIKMANH
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