Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3063 |
Symbol | eprH |
ID | 6491785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2990856 |
End bp | 2991920 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642743218 |
Product | type III secretion apparatus protein PrgH/EprH |
Protein accession | YP_002046837 |
Protein GI | 194448137 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02554] type III secretion system protein PrgH/EprH |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.69246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.188447 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTAGGTC AGAGTGATGC GCTCACTGCT TCAGGTCAAC TCCCTGATAT ACCTGCCGAT AGCTTTTTTA TCCCGCTGGA CCATGGCGGA GTAAATTTTG AAATCCAGGT GGATACGGAT GCGACCGAAA TTATACTCCA TGAGCTGAAA GAAGGAAATT CTGAATCTCG TTCGGTGCAA TTAAATACGC CAATACAGGT CGGTGAATTG CTTATCCTGA TTCGCCCGGA AAGCGAGCCG TGGGTGCCCG AGCAGCCTGA GAAGTTAGAA ACGTCTGCAA AAAAGAACGA GCCGCGTTTT AAAAACGGAA TTGTAGCCGC ACTGGCCGGG TTTTTTATAT TGGGAATTGG GACTGTGGGG ACGTTATGGA TACTTAACTC GCCGCAGCGG CAGGCCGCAG AGCTCGATTC GTTATTGGGG CAGGAGAAGG AGCGTTTTCA GGTGTTGCCA GGACGGGACA AAATGCTCTA TGTCGCTGCG CAAAATGAAA GAGATACGCT GTGGGCTCGT CAGGTTTTAG CGAGGGGCGA TTATGATAAA AATGCGCGAG TGATTAACGA AAACGAAGAA AATAAGCGTA TCTCTACCTG GCTGGATACC TATTATCCGC AGCTTGCTTA TTATCGGCTT CATTTCGATG AGCCGCGTAA ACCCGTTTTC TGGCTAAGCC GCCAGCGAAA CACGATGAGC AAGAAAGAGC TCGAGGTGTT AAGTCAAAAG CTGAGAGCGC TAATGCCTTA CGCGGATTCG GTTAACATCA CGTTGATGGA CGATGTTACC GCAGCAGGCC AGGCGGAAGC GGGGCTAAAA CAGCAGGCGT TACCTTATTC CCGCAGGAAT CATAAGGGGG GCGTAACGTT TGTTATTCAG GGGGCGCTCG ATGATGTAGA AATACTCAGA GCCCGTCAAT TTGTCGATAG CTATTACCGC ACATGGGGAG GACGCTATGT GCAGTTTGCG ATCGAATTAA AAGATGACTG GCTCAAGGGG CGCTCATTTC AGTACGGGGC GGAAGGTTAT ATCAAAATGA GCCCAGGCCA TTGGTATTTC CCAAGCCCAC TTTAA
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Protein sequence | MVGQSDALTA SGQLPDIPAD SFFIPLDHGG VNFEIQVDTD ATEIILHELK EGNSESRSVQ LNTPIQVGEL LILIRPESEP WVPEQPEKLE TSAKKNEPRF KNGIVAALAG FFILGIGTVG TLWILNSPQR QAAELDSLLG QEKERFQVLP GRDKMLYVAA QNERDTLWAR QVLARGDYDK NARVINENEE NKRISTWLDT YYPQLAYYRL HFDEPRKPVF WLSRQRNTMS KKELEVLSQK LRALMPYADS VNITLMDDVT AAGQAEAGLK QQALPYSRRN HKGGVTFVIQ GALDDVEILR ARQFVDSYYR TWGGRYVQFA IELKDDWLKG RSFQYGAEGY IKMSPGHWYF PSPL
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