| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3028 |
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| Symbol | hypF |
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| ID | 6490870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | - |
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| Start bp | 2962248 |
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| End bp | 2964488 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642743183 |
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| Product | [NiFe] hydrogenase maturation protein HypF |
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| Protein accession | YP_002046802 |
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| Protein GI | 194451590 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.0000447787 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGATAG ACACACCTTC CGGCGTACAG CTACGCATTC GGGGCAAAGT ACAGGGCGTC
GGTTTTCGTC CTTTTGTCTG GCAGCTGGCG CAGCAGTTGC GATTACACGG CGACGTGTGT
AATGACGGCG ACGGCGTCGT CGTTCGGCTG CTGGAAGAAC CGTCGCAATT TATTGCCGCG
CTCTATCAGG ATTGCCCGCC GCTGGCGCGC ATTGACAGCG TTGAACACGC GTCGTTGGTA
TGGGAGCGCG CGCCGACGGA TTTCGCTATT CGTCAGAGCG CAGGCGGTTC GATGAACACG
CAAATCGTGC CGGATGCGGC GACCTGCCCG GCATGTCTTG CCGAGATGAA TACCCCAGGC
GAGCGGCGCT ACCGTTATCC TTTCATCAAT TGCACCCACT GTGGACCACG CTTCACCATT
ATTCGTGCTA TGCCCTATGA CCGGCCATTT ACGGTGATGG AGGCGTTTCC CTTGTGTCCG
GAATGCGACA GCGAATACCG CGATCCGTAC GATCGCCGTT TTCATGCCCA GCCCGTTGCC
TGTCCGTCAT GCGGGCCGCA TCTTGAGTGG CGGAGCCAAC ATGAACGAGC GGAAAAAGAG
GCGGCTTTGC AGGCGGCGGT CGCCCAACTG AACGCCGGAG GCATTATTGC CGTTAAAGGG
CTGGGTGGTT TTCATCTGGC CTGCGACGCG CGCAACGATA ACGCAGTGGC GATGCTGCGG
GCGCGTAAAC ATCGTCCGGC GAAACCATTG GCGGTGATGT TGCCCACGGC GCAAACGCTG
CCGACCGCGG CGCGTTCGCT GCTGACCACG CCAGCGGCCC CGATTGTACT GGTGGATAAG
CAGTATGTAC CTTCGCTGAG TGAGGGCATC GCGCCAGGAC TTACGGAAGT GGGCGTGATG
CTGCCAGCCA ACCCATTGCA ACATCTCTTG TTGCAGGCAC TCAATTACCC GCTGGTGATG
ACATCCGGCA ACCTGAGCGG CAAACCGCCC GCCATCACCA ACGAACAGGC GCTGGACGAT
TTACACGATA TTGCCGATGG TTTTCTGTTG CATAATCGCG ACATTGTACA GCGCATGGAC
GACTCTGTCG TGCGCGACAG CGGCGAAATG CTGCGTCGTT CGCGGGGATA CGTGCCGGAC
GCGATTGCGT TGCCGCCCGG ATTTCGCGAT GTGCCGCCGA TACTTTGTCT GGGCGCGGAT
CTGAAAAACA CGTTCTGTCT GGTACGCGGC GAACAGGCGG TTGTCAGCCA ACATTTGGGC
GATCTCAGCG ATGACGGTAT CCAGGCGCAG TGGCGCGAGG CATTGCGTCT GATCCAGTCA
ATCTACGATT TTACGCCAGA GCGTATCGTC TGTGATGCGC ATCCGGGCTA TGTTTCCAGT
CAGTGGGCCA GTGAGATGCG TCTGCCGACA GAGACGGTGT TACACCATCA TGCCCATGCG
GCGGCTTGCC TGGCCGAGCA TGGTTGGCCG CTGGACGGTG GAGAGGTGAT TGCCCTGACG
GTAGACGGTA TCGGCATGGG TGAGAATGGC GCGCTATGGG GCGGAGAATG TTTGCGGGTC
AATTATCGCG AGTGCGAACA TTTAGGCGGT TTACCCGCCG TGGCGCTGCC GGGAGGCGAT
CTGGCTGCCA AACATCCGTG GCGTAATCTG TTGGCGCAGT GCCTGCGCTT TGTGCCGGAC
TGGCAGGATT ATCCGGAGAC AGCGGGGCTG CAACAGCAAA ACTGGAATGT CCTGGCGCGC
GCCATTGAGC GCGGCGTCAA TGCCCCATTG GCGTCTTCCT GCGGGCGGTT GTTTGACGCG
GTGGCTGCCG CGCTTCGCTG CGCGCCAGCA TCGCTTAGCT ATGAGGGCGA GGCCGCCTGC
GCGCTGGAGG CGCTGGCCTC TCAATGCGCT AACGTTGAGC ATCCGGTAAC GATGCCGCTT
AACGGCGCTC AACTGGACGT CGCTGTTTTC TGGCGGCAAT GGTTGAACTG GCAGGCCACG
CCCGCGCAAC GCGCCTGGGC TTTTCATGAT GCGCTGGCGT GCGGGTTTGC CACGCTAATG
CGCCAGCAGG CTACGGCGCG GGGGATAACC ACTCTGGTCT TCAGCGGCGG GGTGATACAC
AACCGCTTAC TTCGCGCGCG TCTTGCCTTT TATCTTTCTG ATTTTAAATT GTTATTTCCG
CAGCGGTTAC CGGCGGGCGA CGGCGGGCTG TCGTTTGGAC AGGGCGTGAT TGCCGCAGCG
CGAGCGTTAA GGGAAGTGTA G
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| Protein sequence | MAIDTPSGVQ LRIRGKVQGV GFRPFVWQLA QQLRLHGDVC NDGDGVVVRL LEEPSQFIAA
LYQDCPPLAR IDSVEHASLV WERAPTDFAI RQSAGGSMNT QIVPDAATCP ACLAEMNTPG
ERRYRYPFIN CTHCGPRFTI IRAMPYDRPF TVMEAFPLCP ECDSEYRDPY DRRFHAQPVA
CPSCGPHLEW RSQHERAEKE AALQAAVAQL NAGGIIAVKG LGGFHLACDA RNDNAVAMLR
ARKHRPAKPL AVMLPTAQTL PTAARSLLTT PAAPIVLVDK QYVPSLSEGI APGLTEVGVM
LPANPLQHLL LQALNYPLVM TSGNLSGKPP AITNEQALDD LHDIADGFLL HNRDIVQRMD
DSVVRDSGEM LRRSRGYVPD AIALPPGFRD VPPILCLGAD LKNTFCLVRG EQAVVSQHLG
DLSDDGIQAQ WREALRLIQS IYDFTPERIV CDAHPGYVSS QWASEMRLPT ETVLHHHAHA
AACLAEHGWP LDGGEVIALT VDGIGMGENG ALWGGECLRV NYRECEHLGG LPAVALPGGD
LAAKHPWRNL LAQCLRFVPD WQDYPETAGL QQQNWNVLAR AIERGVNAPL ASSCGRLFDA
VAAALRCAPA SLSYEGEAAC ALEALASQCA NVEHPVTMPL NGAQLDVAVF WRQWLNWQAT
PAQRAWAFHD ALACGFATLM RQQATARGIT TLVFSGGVIH NRLLRARLAF YLSDFKLLFP
QRLPAGDGGL SFGQGVIAAA RALREV
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