Gene SeHA_C2999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2999 
Symbol 
ID6491370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp2939065 
End bp2940435 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content47% 
IMG OID642743155 
Productputative glycoporin 
Protein accessionYP_002046779 
Protein GI194448709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.419579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.000157267 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGCTA AATATTTGGC GCTGATGATC GGTGCTTGCT TTTCTCATAA CCTTTGGGCA 
GCGAATAATA TCACTATTGA GCAGCGTCTG GCTGAACTGG AGCAACGTGT TGTTAATGCT 
GAAAAACGGG CATCCGATGC CGAGGCGCAA ATTCGCTCGT TGAAACAGCA GCAGGTCGCC 
GCTACGCCGA TGGTGAATGT CCAGTCTGCC GAGCCCATTG CAGCAGGTAA AACACCGCCG 
AAGCTGACCT TATCCGGATT CAGCGATATT AAGTTCTATG GCGATGTCGA ATTTAATATG 
GATGCGGCAA GCCGTTCCGG TAGTCTGACA TCGACGAGAA CGTCAGCGAA TAAAGATTGG 
GCACCGGGAA CCAATGAACG CTGGGATATT AACGGACGCC TGTTGCTGGG CTTTGATGGC 
TACCAGCGGC TGGACAACGG TAATTTTGCC GGATTCTCTG TACAGCCTCT GGCGGACCTG 
ACCGGAAAAA TGAACCTTGA TGATGCCGTT TTCTTCTTTG GTCGTGAGAA TGACTGGAAA 
ATTAAGGTTG GTCGTTTTGA AGCCTACGAT ATGTTCCCAC TGAATCAGGA TACGTTTATT 
GAATATTCGG GGAATACAGC GAACGATCTT TACAGTGACG GTTACGGCTA TATCTATATG 
ATGAAAGAAG GACGGGGACG TAGCGACAGT GGGGGTAACT TCCTGCTGAG TAAAACCATC 
GACAACTGGT ATTTCGAAGT TAACACATTG CTGGAAAATG GCAGTACGTT ATATACCGAG 
AAGCAGTACC ACGGAATGGA TTTGAGCAAC GATAAAAATG TGGCTTACGT CCGTCCGGTT 
ATCGCCTGGC AAAACGGGCG TTTTTCAACG GCGATAGCGA TGGAAAGTAA CGTCGTTAAC 
AACGCCTATG GCTATTATGA GAATGGGAAG TGGATCGATC AGTCAGATCG TACGGGCTAT 
GGTTTTACCA TGACCTGGAA TGGTCAAAAA ACTGACCCGG AAGATGGCGC AGTGATTAAC 
CTGAATACCG CCTATATGGA TGCGACCGAT GAGACAGATT TTACCGCTGG GGTGAATGCG 
CTGTGGCATC GATTTGAACT GGGTTATATC TATGCGCATA ACAAAATCGA AGCCTTCAAT 
GCTACTAATA TCGATGCCGT TTGTGAGGAC GATTGCTGGA TCACCGATCC CGGCAATTAT 
GATATTCACA CTATTCATGC CTCATATTTA TTCCCCAACG TGATGGATAT GAAAAACTTT 
AACATCTACC TCGGTGCCTA TGCTTCATGG GTAGAGGCCA ATCCGAATAA TGGCGATAAC 
AGTGAAGATG CGCGTTACGG CGGGCGTCTG AGATTCAAAT ATTTCTTCTG A
 
Protein sequence
MKAKYLALMI GACFSHNLWA ANNITIEQRL AELEQRVVNA EKRASDAEAQ IRSLKQQQVA 
ATPMVNVQSA EPIAAGKTPP KLTLSGFSDI KFYGDVEFNM DAASRSGSLT STRTSANKDW 
APGTNERWDI NGRLLLGFDG YQRLDNGNFA GFSVQPLADL TGKMNLDDAV FFFGRENDWK 
IKVGRFEAYD MFPLNQDTFI EYSGNTANDL YSDGYGYIYM MKEGRGRSDS GGNFLLSKTI 
DNWYFEVNTL LENGSTLYTE KQYHGMDLSN DKNVAYVRPV IAWQNGRFST AIAMESNVVN 
NAYGYYENGK WIDQSDRTGY GFTMTWNGQK TDPEDGAVIN LNTAYMDATD ETDFTAGVNA 
LWHRFELGYI YAHNKIEAFN ATNIDAVCED DCWITDPGNY DIHTIHASYL FPNVMDMKNF 
NIYLGAYASW VEANPNNGDN SEDARYGGRL RFKYFF